RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PPARDQ03181 441 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SETDB1Q15047 1291 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 WASHC2DQ5SRD0 308 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 BZW1Q7L1Q6 419 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 TRABD2AQ86V40 505 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SEMA4DQ92854 862 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 TMX4Q9H1E5 349 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 PCIF1Q9H4Z3 704 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 CORO1CQ9ULV4 474 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 G3V3G9 751 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ZBED4O75132 1171 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 CYP1A1P04798 512 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 CREB1P16220 341 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ATP2A2P16615 1042 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ADSSP30520 456 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 CETN2P41208 172 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 MOGSQ13724 837 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 LRRC14Q15048 493 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SNRNP35Q16560 246 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 RHOT1Q8IXI2 618 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 RDM1Q8NG50 284 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 PITPNM3Q9BZ71 974 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 TLE6Q9H808 572 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 SLC24A2Q9UI40 661 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ANAPC7Q9UJX3 599 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 DRG1Q9Y295 367 aaKnown RBP16.19■□□□□ 0.18
C9orf3-204ENST00000424143 PCDHB2Q9Y5E7 798 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 UBIAD1Q9Y5Z9 338 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 ZHX2Q9Y6X8 837 aa16.19■□□□□ 0.18
C9orf3-204ENST00000424143 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 MROH7Q68CQ1 1323 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 KIF3CO14782 793 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 CLGNO14967 610 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 PTPN7P35236 360 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 MAGEA4P43358 317 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 CLDN10P78369 228 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 MGAT5Q09328 741 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 TCP10Q12799 353 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 BLMHQ13867 455 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 SPARCL1Q14515 664 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 NAA25Q14CX7 972 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 TMEM63BQ5T3F8 832 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 LIN9Q5TKA1 542 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 ZNF365Q70YC5 407 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 ENDOVQ8N8Q3 282 aaKnown RBP16.18■□□□□ 0.18
C9orf3-204ENST00000424143 BTBD6Q96KE9 485 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 RMDN2Q96LZ7 410 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 POP1Q99575 1024 aaKnown RBP16.18■□□□□ 0.18
C9orf3-204ENST00000424143 TUBB6Q9BUF5 446 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 SAR1AQ9NR31 198 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 TBX20Q9UMR3 447 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 L3MBTL1Q9Y468 752 aa16.18■□□□□ 0.18
C9orf3-204ENST00000424143 SMCHD1A6NHR9 2005 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 MYPNQ86TC9 1320 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 ATMINO43313 823 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 GDF11O95390 407 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 LMNAP02545 664 aaKnown RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 GNAZP19086 355 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 GARTP22102 1010 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 FOXN2P32314 431 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 GCKP35557 465 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 WDR4P57081 412 aaKnown RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 RTP1P59025 263 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 IRX1P78414 480 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 RNASELQ05823 741 aaKnown RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 PDK4Q16654 411 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 LRRC38Q5VT99 294 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 C15orf39Q6ZRI6 1047 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 OTUD6AQ7L8S5 288 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 CYP4X1Q8N118 509 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 ANKRD42Q8N9B4 389 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 ANKLE1Q8NAG6 615 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 ZNF570Q96NI8 536 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 KIAA1586Q9HCI6 787 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 AGO4Q9HCK5 861 aaKnown RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 MRPL47Q9HD33 250 aaKnown RBP16.17■□□□□ 0.18
C9orf3-204ENST00000424143 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
C9orf3-204ENST00000424143 CCDC189A1A4V9 331 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 DIAPH2O60879 1101 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 ITGB5P18084 799 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 JAG1P78504 1218 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 SLC45A4Q5BKX6 768 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 IZUMO3Q5VZ72 239 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-204ENST00000424143 FBXO41Q8TF61 875 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 RNPEPL1Q9HAU8 725 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
C9orf3-204ENST00000424143 UMODL1Q5DID0 1318 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms