RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 C5orf67F2Z3F1 127 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 F8W810 466 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 CETN3O15182 167 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 FGF18O76093 207 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 ITGB1P05556 798 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 CLCNKBP51801 687 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 FKBP3Q00688 224 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 LRRC63Q05C16 580 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 GPM6BQ13491 265 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM132DQ14C87 1099 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 LMBRD2Q68DH5 695 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 TTI2Q6NXR4 508 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 EFCAB13Q8IY85 973 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 SLC39A11Q8N1S5 342 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 BCL7CQ8WUZ0 217 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 MED15Q96RN5 788 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 POP1Q99575 1024 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 COLEC11Q9BWP8 271 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 RWDD2AQ9UIY3 292 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 UBQLN1Q9UMX0 589 aaKnown RBP10.05□□□□□ -0.8
PDGFC-202ENST00000422544 DERAQ9Y315 318 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 WDR87Q6ZQQ6 2873 aa10.05□□□□□ -0.8
PDGFC-202ENST00000422544 BICDL2A1A5D9 508 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 H3BNC9 293 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PODXLO00592 558 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 GRM6O15303 877 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 TADA2AO75478 443 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 B3GAT3O94766 335 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 CSPG5O95196 566 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 CYP3A5P20815 502 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 DNAJB1P25685 340 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PSMC2P35998 433 aaKnown RBP10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 KRT17Q04695 432 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PSMD6Q15008 389 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 SURF1Q15526 300 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 UPP1Q16831 310 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 SPATA1Q5VX52 437 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 SCARA3Q6AZY7 606 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 DCLRE1AQ6PJP8 1040 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 FAM186BQ8IYM0 893 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 BEST2Q8NFU1 509 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 SPPL3Q8TCT6 385 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PLEKHO2Q8TD55 490 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 HASPINQ8TF76 798 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 GDPD5Q8WTR4 605 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
PDGFC-202ENST00000422544 IGSF21Q96ID5 467 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 UROC1Q96N76 676 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 GZF1Q9H116 711 aaPredicted RBP10.04□□□□□ -0.8
PDGFC-202ENST00000422544 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 PTPRJQ12913 1337 aa10.04□□□□□ -0.8
PDGFC-202ENST00000422544 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 PPEF2O14830 753 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 LPXNO60711 386 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 LETM1O95202 739 aaPredicted RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 KIF4AO95239 1232 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 EPB41P11171 864 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 DMDP11532 3685 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 TNNI1P19237 187 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 LRPAP1P30533 357 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 RPL9P32969 192 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 PPM1AP35813 382 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 VAMP7P51809 220 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 DLG4P78352 724 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 TYRO3Q06418 890 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 DUOXA2Q1HG44 320 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 CD300LGQ6UXG3 332 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 TAS1R1Q7RTX1 841 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 NT5DC4Q86YG4 428 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 WDR49Q8IV35 697 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 ZC3H3Q8IXZ2 948 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 C3orf58Q8NDZ4 430 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 OR5B17Q8NGF7 314 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 PARD3BQ8TEW8 1205 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 CACTINQ8WUQ7 758 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 POF1BQ8WVV4 589 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM169Q96HH4 297 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 VN1R3Q9BXE9 311 aa10.03□□□□□ -0.8
PDGFC-202ENST00000422544 SRRTQ9BXP5 876 aaKnown RBP10.03□□□□□ -0.8
PDGFC-202ENST00000422544 MTMR12Q9C0I1 747 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms