RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 USP49Q70CQ1 688 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 GET4Q7L5D6 327 aaPredicted RBP27.83■■■□□ 2.05
SMDT1-202ENST00000422252 PLEKHA5Q9HAU0 1116 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 FOXD4L1Q9NU39 408 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.83■■■□□ 2.05
SMDT1-202ENST00000422252 CCDC39Q9UFE4 941 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 NUB1Q9Y5A7 615 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 KMT2EQ8IZD2 1858 aa27.83■■■□□ 2.04
SMDT1-202ENST00000422252 SYN3O14994 580 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 CEBPZQ03701 1054 aaKnown RBP27.82■■■□□ 2.04
SMDT1-202ENST00000422252 KYAT1Q16773 422 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 UVSSAQ2YD98 709 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 AXDND1Q5T1B0 1012 aaPredicted RBP27.82■■■□□ 2.04
SMDT1-202ENST00000422252 PRSS33Q8NF86 280 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 SLC7A14Q8TBB6 771 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 DUSP12Q9UNI6 340 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 MTMR6Q9Y217 621 aa27.82■■■□□ 2.04
SMDT1-202ENST00000422252 ABCD1P33897 745 aa27.81■■■□□ 2.04
SMDT1-202ENST00000422252 VARS2Q5ST30 1063 aaKnown RBP27.81■■■□□ 2.04
SMDT1-202ENST00000422252 GRASPQ7Z6J2 395 aaPredicted RBP27.81■■■□□ 2.04
SMDT1-202ENST00000422252 CLIC6Q96NY7 704 aa27.81■■■□□ 2.04
SMDT1-202ENST00000422252 FIZ1Q96SL8 496 aa27.81■■■□□ 2.04
SMDT1-202ENST00000422252 STK17AQ9UEE5 414 aa27.81■■■□□ 2.04
SMDT1-202ENST00000422252 TUBGCP4Q9UGJ1 667 aa27.81■■■□□ 2.04
SMDT1-202ENST00000422252 ZDBF2Q9HCK1 2354 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 TTC26A0AVF1 554 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 CCL16O15467 120 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 XYLBO75191 536 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 FSHRP23945 695 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 TNFSF9P41273 254 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 GTF2BQ00403 316 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 RTL10Q7L3V2 364 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 KRI1Q8N9T8 703 aaKnown RBP27.8■■■□□ 2.04
SMDT1-202ENST00000422252 RSAD2Q8WXG1 361 aa27.8■■■□□ 2.04
SMDT1-202ENST00000422252 ZSCAN16Q9H4T2 348 aaPredicted RBP27.8■■■□□ 2.04
SMDT1-202ENST00000422252 PDCD11Q14690 1871 aaKnown RBP27.8■■■□□ 2.04
SMDT1-202ENST00000422252 OGTO15294 1046 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 STX6O43752 255 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 POU2F2P09086 479 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 LAMP2P13473 410 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 NMT1P30419 496 aaKnown RBP27.79■■■□□ 2.04
SMDT1-202ENST00000422252 MCM4P33991 863 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 TXLNAP40222 546 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 PPP2R3AQ06190 1150 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 SLC8B1Q6J4K2 584 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 MAP4K3Q8IVH8 894 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 NXPE3Q969Y0 559 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 KIF12Q96FN5 646 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 SUSD3Q96L08 255 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 POLIQ9UNA4 740 aa27.79■■■□□ 2.04
SMDT1-202ENST00000422252 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.79■■■□□ 2.04
SMDT1-202ENST00000422252 MORC2Q9Y6X9 1032 aaPredicted RBP27.79■■■□□ 2.04
SMDT1-202ENST00000422252 H7C4K7 107 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 FAM189A1O60320 539 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 PTPN5P54829 565 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 NTHL1P78549 312 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 ROR1Q01973 937 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 SPAG1Q07617 926 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 USP28Q96RU2 1077 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 MSTO1Q9BUK6 570 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 MFSD1Q9H3U5 465 aa27.78■■■□□ 2.04
SMDT1-202ENST00000422252 UBQLN1Q9UMX0 589 aaKnown RBP27.78■■■□□ 2.04
SMDT1-202ENST00000422252 ZFP37Q9Y6Q3 630 aaPredicted RBP27.78■■■□□ 2.04
SMDT1-202ENST00000422252 DOCK8Q8NF50 2099 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 A0A0B4J269 797 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 LACTBL1A8MY62 500 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 TBC1D4O60343 1298 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 CYP3A5P20815 502 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 LRPAP1P30533 357 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 MRPL58Q14197 206 aaKnown RBP27.77■■■□□ 2.04
SMDT1-202ENST00000422252 SLC39A14Q15043 492 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 ZBTB6Q15916 424 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 ENOX2Q16206 610 aaKnown RBP27.77■■■□□ 2.04
SMDT1-202ENST00000422252 ZBTB41Q5SVQ8 909 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 RRAGBQ5VZM2 374 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 SLC39A4Q6P5W5 647 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 DYMQ7RTS9 669 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 ZNF461Q8TAF7 563 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 ST6GALNAC4Q9H4F1 302 aa27.77■■■□□ 2.04
SMDT1-202ENST00000422252 RPF1Q9H9Y2 349 aaKnown RBP27.77■■■□□ 2.04
SMDT1-202ENST00000422252 NARSO43776 548 aaKnown RBP27.76■■■□□ 2.03
SMDT1-202ENST00000422252 ZC2HC1CQ53FD0 456 aaPredicted RBP27.76■■■□□ 2.03
SMDT1-202ENST00000422252 SV2BQ7L1I2 683 aa27.76■■■□□ 2.03
SMDT1-202ENST00000422252 SLC44A3Q8N4M1 653 aa27.76■■■□□ 2.03
SMDT1-202ENST00000422252 APPL2Q8NEU8 664 aa27.76■■■□□ 2.03
SMDT1-202ENST00000422252 TSPAN18Q96SJ8 248 aa27.76■■■□□ 2.03
SMDT1-202ENST00000422252 FBXL21Q9UKT6 434 aa27.76■■■□□ 2.03
SMDT1-202ENST00000422252 WDR27A2RRH5 827 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 XPOTO43592 962 aaKnown RBP27.75■■■□□ 2.03
SMDT1-202ENST00000422252 ABLIM3O94929 683 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 ADRB2P07550 413 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 NUBP1P53384 320 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 ARPP19P56211 112 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 TCF15Q12870 199 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 ASTLQ6HA08 431 aaPredicted RBP27.75■■■□□ 2.03
SMDT1-202ENST00000422252 ZNF280DQ6N043 979 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 SFR1Q86XK3 245 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 TMEM130Q8N3G9 435 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 DDX12PQ92771 950 aa27.75■■■□□ 2.03
SMDT1-202ENST00000422252 FBXL5Q9UKA1 691 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms