RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 CASTOR2A6NHX0 329 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
UFD1-203ENST00000421968 CD59P13987 128 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 TNK2Q07912 1038 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 TEAD2Q15562 447 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 UGCGQ16739 394 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 SYT12Q8IV01 421 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 ELMOD1Q8N336 334 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
UFD1-203ENST00000421968 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 GPR88Q9GZN0 384 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 POLMQ9NP87 494 aaPredicted RBP13.28□□□□□ -0.28
UFD1-203ENST00000421968 FSCN3Q9NQT6 498 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 ABCA12Q86UK0 2595 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 DPYSL4O14531 572 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 SH3BP5O60239 455 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 AKAP5P24588 427 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 SREBF1P36956 1147 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 DMC1Q14565 340 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
UFD1-203ENST00000421968 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 HACE1Q8IYU2 909 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 CMTR1Q8N1G2 835 aaKnown RBP13.27□□□□□ -0.29
UFD1-203ENST00000421968 ZNF512Q96ME7 567 aaPredicted RBP13.27□□□□□ -0.29
UFD1-203ENST00000421968 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 DISC1Q9NRI5 854 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
UFD1-203ENST00000421968 IGLV3-22A0A075B6J6 115 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ERLIN2O94905 339 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 PLEKHA8P1O95397 391 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 EGFP01133 1207 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 TRDNQ13061 729 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 TUSC3Q13454 348 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 PTPAQ15257 358 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 LPCAT2Q7L5N7 544 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 TICAM2Q86XR7 235 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 MINDY1Q8N5J2 469 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ZNF461Q8TAF7 563 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 LRRC3BQ96PB8 259 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ATXN2Q99700 1313 aaKnown RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ARID3AQ99856 593 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 TRIM6Q9C030 488 aaPredicted RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 NXF3Q9H4D5 531 aaKnown RBP13.26□□□□□ -0.29
UFD1-203ENST00000421968 ASAH2Q9NR71 780 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 ZMYM2Q9UBW7 1377 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
UFD1-203ENST00000421968 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 KNTC1P50748 2209 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 TNFRSF10BO14763 440 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 FGFR3P22607 806 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 ROR1Q01973 937 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
UFD1-203ENST00000421968 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 LRRC69Q6ZNQ3 347 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 TMPRSS7Q7RTY8 843 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 KRT25Q7Z3Z0 450 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 MARCH9Q86YJ5 346 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 ARID3BQ8IVW6 561 aaPredicted RBP13.25□□□□□ -0.29
UFD1-203ENST00000421968 LEMD2Q8NC56 503 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 TSTD1Q8NFU3 115 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 OR2I1PQ8NGU4 316 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 RPLP0P6Q8NHW5 317 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 CSRNP2Q9H175 543 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 PARP2Q9UGN5 583 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 INSL5Q9Y5Q6 135 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 BACE2Q9Y5Z0 518 aa13.25□□□□□ -0.29
UFD1-203ENST00000421968 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 TEX51A0A1B0GUA7 166 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
UFD1-203ENST00000421968 MAFO75444 373 aaPredicted RBP13.24□□□□□ -0.29
UFD1-203ENST00000421968 PTGER3P43115 390 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 GNAQP50148 359 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 TAF1BQ53T94 588 aaPredicted RBP13.24□□□□□ -0.29
UFD1-203ENST00000421968 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 PCSK4Q6UW60 755 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 GPR155Q7Z3F1 870 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 TCEAL8Q8IYN2 117 aa13.24□□□□□ -0.29
UFD1-203ENST00000421968 SHKBP1Q8TBC3 707 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms