RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SPATA20Q8TB22 786 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 CACTINQ8WUQ7 758 aaKnown RBP17.08■□□□□ 0.32
BRAT1-202ENST00000421712 VN1R3Q9BXE9 311 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 GPR62Q9BZJ7 368 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 ZBP1Q9H171 429 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 PDE11AQ9HCR9 933 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
BRAT1-202ENST00000421712 HIDE1A8MVS5 230 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 NR3C1P04150 777 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 CYP3A5P20815 502 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 NRIP1P48552 1158 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
BRAT1-202ENST00000421712 SURF1Q15526 300 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 ZBTB6Q15916 424 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 FAM171A1Q5VUB5 890 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 SPATA1Q5VX52 437 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 C12orf56Q8IXR9 622 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 MRPL43Q8N983 215 aaKnown RBP17.07■□□□□ 0.32
BRAT1-202ENST00000421712 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 TSG101Q99816 390 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 HERC2P3Q9BVR0 1158 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 SSX2IPQ9Y2D8 614 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 C2CD2Q9Y426 696 aa17.07■□□□□ 0.32
BRAT1-202ENST00000421712 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
BRAT1-202ENST00000421712 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-202ENST00000421712 RPL13P26373 211 aaKnown RBP17.06■□□□□ 0.32
BRAT1-202ENST00000421712 MCM4P33991 863 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 GLUD2P49448 558 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 B3GALT6Q96L58 329 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 EMILIN2Q9BXX0 1053 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 NUP62CLQ9H1M0 184 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
BRAT1-202ENST00000421712 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
BRAT1-202ENST00000421712 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 I3L4J1 428 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 NCK2O43639 380 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 TMEM191BP0C7N4 346 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 TNNI1P19237 187 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 NR2F2P24468 414 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 LRPAP1P30533 357 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 GTF2F1P35269 517 aaKnown RBP eCLIP17.05■□□□□ 0.32
BRAT1-202ENST00000421712 BRCC3P46736 316 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 WNT7BP56706 349 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 HYAL1Q12794 435 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-202ENST00000421712 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 SLC9A9Q8IVB4 645 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 EFCAB13Q8IY85 973 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-202ENST00000421712 ANKRD36BP1Q96IX9 119 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 TTPALQ9BTX7 342 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 CLDND1Q9NY35 253 aa17.05■□□□□ 0.32
BRAT1-202ENST00000421712 PDCD11Q14690 1871 aaKnown RBP17.05■□□□□ 0.32
BRAT1-202ENST00000421712 TRANK1O15050 2925 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 ANK1P16157 1881 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 PSMA7O14818 248 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 TNNC2P02585 160 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 KRT19P08727 400 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 KLRC2P26717 231 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 PPP1R2P41236 205 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 ADAM9Q13443 819 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 MORC3Q14149 939 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 MYBPC2Q14324 1141 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 PTPN14Q15678 1187 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 C9orf57Q5W0N0 161 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 DSTYKQ6XUX3 929 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 CSGALNACT2Q8N6G5 542 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 GPT2Q8TD30 523 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 HLA-CQ95604 372 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 CDCA3Q99618 268 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-202ENST00000421712 PRDM6Q9NQX0 595 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 DMAC2Q9NW81 257 aa17.04■□□□□ 0.32
BRAT1-202ENST00000421712 CASP4P49662 377 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 NDUFV1P49821 464 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 DSG1Q02413 1049 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 PSMD6Q15008 389 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 DUSP6Q16828 381 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 COBLL1Q53SF7 1204 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 KIAA0319Q5VV43 1072 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 CD300LGQ6UXG3 332 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-202ENST00000421712 RNF168Q8IYW5 571 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-202ENST00000421712 TRIML1Q8N9V2 468 aa17.03■□□□□ 0.32
BRAT1-202ENST00000421712 DHTKD1Q96HY7 919 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms