RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ADAM33Q9BZ11 813 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 E7ENQ6 273 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 F5H6K3 240 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 CACNB3P54284 484 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 PPP2R5CQ13362 524 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 GNPTABQ3T906 1256 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 LLGL2Q6P1M3 1020 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 LMNTD2Q8IXW0 634 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 C4orf33Q8N1A6 199 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 KCTD17Q8N5Z5 321 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 C10orf82Q8WW14 230 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 SHC3Q92529 594 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 GOLGA8IPA6NC78 632 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 GOLGA8JA6NMD2 632 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 GAS7O60861 476 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 MAGEA4P43358 317 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 CDR2Q01850 454 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 TBC1D10BQ4KMP7 808 aaPredicted RBP22.6■■□□□ 1.21
USP48-205ENST00000421625 HP1BP3Q5SSJ5 553 aaPredicted RBP22.6■■□□□ 1.21
USP48-205ENST00000421625 DHX38Q92620 1227 aaKnown RBP22.6■■□□□ 1.21
USP48-205ENST00000421625 CCDC17Q96LX7 622 aa22.6■■□□□ 1.21
USP48-205ENST00000421625 RBM15Q96T37 977 aaKnown RBP eCLIP22.6■■□□□ 1.212e-7■■■□□ 16.7
USP48-205ENST00000421625 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.6■■□□□ 1.21
USP48-205ENST00000421625 EXOC1LA0A1B0GW35 172 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 P4HA2O15460 535 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 EDF1O60869 148 aaKnown RBP22.59■■□□□ 1.21
USP48-205ENST00000421625 DCTN3O75935 186 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 BMP3P12645 472 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 MAN1A1P33908 653 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 TCP10Q12799 353 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 PKN2Q16513 984 aaKnown RBP22.59■■□□□ 1.21
USP48-205ENST00000421625 UNC45AQ9H3U1 944 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 HSPBP1Q9NZL4 362 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 NYAP2Q9P242 653 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 ARHGEF35A5YM69 484 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 POC1B-GALNT4F8VUJ3 575 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 RALAP11233 206 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 RPA3P35244 121 aaPredicted RBP22.59■■□□□ 1.21
USP48-205ENST00000421625 TAF1BQ53T94 588 aaPredicted RBP22.59■■□□□ 1.21
USP48-205ENST00000421625 C2CD6Q53TS8 623 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 ZNF365Q70YC5 407 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.59■■□□□ 1.21
USP48-205ENST00000421625 LXNQ9BS40 222 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 TRABDQ9H4I3 376 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 KIAA1586Q9HCI6 787 aa22.59■■□□□ 1.21
USP48-205ENST00000421625 FESP07332 822 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 FGFR1P11362 822 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 MXRA7P84157 204 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 SPARCL1Q14515 664 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 CERKLQ49MI3 558 aaPredicted RBP22.58■■□□□ 1.21
USP48-205ENST00000421625 AP1ARQ63HQ0 302 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 ACAD10Q6JQN1 1059 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 CAPN12Q6ZSI9 719 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 NUMBLQ9Y6R0 609 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.21
USP48-205ENST00000421625 NDUFB10O96000 172 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 ADRB2P07550 413 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 MYBPC2Q14324 1141 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 SLC1A5Q15758 541 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 RFWD3Q6PCD5 774 aa22.58■■□□□ 1.21
USP48-205ENST00000421625 DDX1Q92499 740 aaKnown RBP22.58■■□□□ 1.21
USP48-205ENST00000421625 MRRFQ96E11 262 aaKnown RBP22.58■■□□□ 1.21
USP48-205ENST00000421625 DDX27Q96GQ7 796 aaKnown RBP22.58■■□□□ 1.21
USP48-205ENST00000421625 LRRD1A4D1F6 860 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 GRIN3BO60391 1043 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 AP1G2O75843 785 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 CFBP00751 764 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 ALDH3A1P30838 453 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 MFAP3P55082 362 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 SESN3P58005 492 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 MRPS35P82673 323 aaKnown RBP22.58■■□□□ 1.2
USP48-205ENST00000421625 PDK4Q16654 411 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 WASHC2DQ5SRD0 308 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 DNAJC9Q8WXX5 260 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 PIDD1Q9HB75 910 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 SAYSD1Q9NPB0 183 aa22.58■■□□□ 1.2
USP48-205ENST00000421625 MROH7Q68CQ1 1323 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 SMIM24O75264 130 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 XXYLT1Q8NBI6 393 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 LRRC8CQ8TDW0 803 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 TSC22D3Q99576 134 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 USP20Q9Y2K6 914 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 ATRNL1Q5VV63 1379 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 AHCYL1O43865 530 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 GDF11O95390 407 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 NEFHP12036 1026 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 FASTKD3Q14CZ7 662 aaKnown RBP22.57■■□□□ 1.2
USP48-205ENST00000421625 TMEM154Q6P9G4 183 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 MAIP1Q8WWC4 291 aa22.57■■□□□ 1.2
USP48-205ENST00000421625 PRPF4O43172 522 aaKnown RBP eCLIP22.56■■□□□ 1.2
USP48-205ENST00000421625 GNAT1P11488 350 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 KRT15P19012 456 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 KLF1Q13351 362 aaPredicted RBP22.56■■□□□ 1.2
USP48-205ENST00000421625 P3H1Q32P28 736 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 CCDC125Q86Z20 511 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 EGFL6Q8IUX8 553 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 MIPEPQ99797 713 aa22.56■■□□□ 1.2
USP48-205ENST00000421625 LBHD1Q9BQE6 289 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms