RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 ERVFC1P60507 584 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 PLCB3Q01970 1234 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 ADAM9Q13443 819 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 NFIL3Q16649 462 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 TAS1R1Q7RTX1 841 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 CD302Q8IX05 232 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 B3GALT6Q96L58 329 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 MFSD14AQ96MC6 490 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 MED15Q96RN5 788 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 GAS2L1Q99501 681 aaPredicted RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 DUSP9Q99956 384 aaKnown RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 GTPBP4Q9BZE4 634 aaKnown RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 GPR62Q9BZJ7 368 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 ADAM28Q9UKQ2 775 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 UBQLN1Q9UMX0 589 aaKnown RBP13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
AC004540.1-205ENST00000420774 I3L4J1 428 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 B3GAT3O94766 335 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 FOSL2P15408 326 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 BRCC3P46736 316 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 NLRP12P59046 1061 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 DLG4P78352 724 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 KRT17Q04695 432 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 PAK1Q13153 545 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 PSMD6Q15008 389 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 KLHL40Q2TBA0 621 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 PLPP4Q5VZY2 271 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 TTI2Q6NXR4 508 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 FUT10Q6P4F1 479 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 TMEM174Q8WUU8 243 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 TSG101Q99816 390 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 TLR9Q9NR96 1032 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 DPP3Q9NY33 737 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 DERAQ9Y315 318 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 XIRP2A4UGR9 3374 aa13.73□□□□□ -0.21
AC004540.1-205ENST00000420774 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 TADA2AO75478 443 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 EFEMP2O95967 443 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 CYP3A5P20815 502 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 LRPAP1P30533 357 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 LRRC63Q05C16 580 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 ADGRD2Q7Z7M1 963 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 ZC3H3Q8IXZ2 948 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 C1orf127Q8N9H9 656 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 MRPL38Q96DV4 380 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 UROC1Q96N76 676 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 ZBP1Q9H171 429 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 INTS13Q9NVM9 706 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 FRMD4BQ9Y2L6 1034 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
AC004540.1-205ENST00000420774 HIDE1A8MVS5 230 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 FSCN2O14926 492 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 XPOTO43592 962 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 ITGB3P05106 788 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 TRIM49P0CI25 452 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 TRIM49CP0CI26 452 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 TNNI1P19237 187 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 POLR2BP30876 1174 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 CA8P35219 290 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 PPP1R2P41236 205 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 UBE3AQ05086 875 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 C1orf220Q5T0J3 134 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 C9orf57Q5W0N0 161 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 DCLRE1AQ6PJP8 1040 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 WDR49Q8IV35 697 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 MLKLQ8NB16 471 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 CXorf38Q8TB03 319 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
AC004540.1-205ENST00000420774 SIX4Q9UIU6 781 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms