RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CXCL8P10145 99 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 SCP2P22307 547 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CDH8P55286 799 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CLDN10P78369 228 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 GCNT1Q02742 428 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 GPS2Q13227 327 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CLEC16AQ2KHT3 1053 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 FAM182AQ5T1J6 154 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ACAD10Q6JQN1 1059 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 TAPT1Q6NXT6 567 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 EFCAB13Q8IY85 973 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ZIM3Q96PE6 472 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 FDXACB1Q9BRP7 624 aaPredicted RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 KLHL11Q9NVR0 708 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 GZMAP12544 262 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 UNGP13051 313 aaPredicted RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 GNA15P30679 374 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 GTF2H1P32780 548 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 PEX5P50542 639 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 EPHB4P54760 987 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 TTLL4Q14679 1199 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 ZNF568Q3ZCX4 644 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 UBAP2Q5T6F2 1119 aaKnown RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 SLFN12LQ6IEE8 588 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 HERPUD2Q9BSE4 406 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 CCDC113Q9H0I3 377 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 USTQ9Y2C2 406 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 H0YCG3 227 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 GPR25O00155 361 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 ABLIM1O14639 778 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 THAP12O43422 761 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 TCF4P15884 667 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 BRD2P25440 801 aaKnown RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 SNX1Q13596 522 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 IER5Q5VY09 327 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 TTC27Q6P3X3 843 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 MMS22LQ6ZRQ5 1243 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
SNCA-206ENST00000420646 HEMGNQ9BXL5 484 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 CENPHQ9H3R5 247 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 MROH8Q9H579 483 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 AKT3Q9Y243 479 aa9.41□□□□□ -0.9
SNCA-206ENST00000420646 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 LGR5O75473 907 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 PIGRP01833 764 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 LGALS2P05162 132 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 CLTAP09496 248 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 RPL7AP62424 266 aaKnown RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 GRM1Q13255 1194 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 ATP13A4Q4VNC1 1196 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 GLE1Q53GS7 698 aaKnown RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 DPP9Q86TI2 863 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 MCOLN2Q8IZK6 566 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 C1orf54Q8WWF1 131 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 ATG4AQ8WYN0 398 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 PIK3R5Q8WYR1 880 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 ACSF2Q96CM8 615 aaPredicted RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 CGRRF1Q99675 332 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 TMEM134Q9H6X4 195 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 KIAA1586Q9HCI6 787 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 PCDHB2Q9Y5E7 798 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 ZNFX1Q9P2E3 1918 aaKnown RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 MROH7Q68CQ1 1323 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 IGKV6-21A0A0C4DH24 114 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 SNAI1O95863 264 aaPredicted RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 CYP1A2P05177 515 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 MAPK4P31152 587 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 CYP2C19P33261 490 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 SSR1P43307 286 aaKnown RBP9.4□□□□□ -0.9
SNCA-206ENST00000420646 DPH6Q7L8W6 267 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 PRELID2Q8N945 189 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 CARD9Q9H257 536 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 SNX24Q9Y343 169 aa9.4□□□□□ -0.9
SNCA-206ENST00000420646 C22orf31O95567 290 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 NFICP08651 508 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 HOXC6P09630 235 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 NSFP46459 744 aaKnown RBP9.4□□□□□ -0.91
SNCA-206ENST00000420646 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.91
SNCA-206ENST00000420646 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.91
SNCA-206ENST00000420646 POU5F1Q01860 360 aaKnown RBP9.4□□□□□ -0.91
SNCA-206ENST00000420646 PAK2Q13177 524 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 EMBQ6PCB8 327 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.91
SNCA-206ENST00000420646 BRSK2Q8IWQ3 736 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms