RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 UBAP2Q5T6F2 1119 aaKnown RBP6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 TMC3Q7Z5M5 1100 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 HOOK3Q86VS8 718 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 ANKS1AQ92625 1134 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 LRCH3Q96II8 777 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 CNNM2Q9H8M5 875 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 VPS54Q9P1Q0 977 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 LUC7L2Q9Y383 392 aaKnown RBP6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 BRCA2P51587 3418 aa6.86□□□□□ -1.31
AC009404.1-201ENST00000420330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 LGALS16A8MUM7 142 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 MAGEB3O15480 346 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SUPT3HO75486 399 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 UNC5CO95185 931 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CA8P35219 290 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 HAND2P61296 217 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 GIT2Q14161 759 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PARP6Q2NL67 630 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 IQSEC1Q6DN90 963 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CCDC65Q8IXS2 484 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 LRRC43Q8N309 656 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RETREG2Q8NC44 543 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 STKLD1Q8NE28 680 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PAGE5Q96GU1 130 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PRMT1Q99873 361 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 VCXQ9H320 206 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ARHGAP20Q9P2F6 1191 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SCOCQ9UIL1 159 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SH3GLB1Q9Y371 365 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TMED5Q9Y3A6 229 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 COMMD3-BMI1R4GMX3 469 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 MYH6P13533 1939 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 MKI67P46013 3256 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PJA2O43164 708 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ATP9AO75110 1047 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PSMC1P62191 440 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 OCRLQ01968 901 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CNTN2Q02246 1040 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TNFAIP2Q03169 654 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 UBXN1Q04323 297 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 KCNA10Q16322 511 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 MB21D2Q8IYB1 491 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CYP4X1Q8N118 509 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 LRMDAQ9H2I8 198 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RETREG1Q9H6L5 497 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RXFP1Q9HBX9 757 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 LUC7LQ9NQ29 371 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 CHMP2BQ9UQN3 213 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 USP15Q9Y4E8 981 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SPO11Q9Y5K1 396 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TMEM247A6NEH6 219 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TIMM44O43615 452 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 TACC1O75410 805 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 GRIA2P42262 883 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PSMD7P51665 324 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PMS1P54277 932 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RCN2Q14257 317 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 BCL2A1Q16548 175 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 USH1GQ495M9 461 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ASPRV1Q53RT3 343 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ZNF554Q86TJ5 538 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SEC14L1Q92503 715 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 BHMTQ93088 406 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 LENG1Q96BZ8 264 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 SLC7A6OSQ96CW6 309 aaPredicted RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 DDX50Q9BQ39 737 aaKnown RBP6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 AP5M1Q9H0R1 490 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RWDD2AQ9UIY3 292 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 RABL2BQ9UNT1 228 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 PCDHA13Q9Y5I0 950 aa6.85□□□□□ -1.31
AC009404.1-201ENST00000420330 ABCB11O95342 1321 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 TMEM265A0A087WTH1 108 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 KLF18A0A0U1RQI7 1052 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 MAGEA13PA6NCF6 341 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 TRIM43BA6NCK2 446 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 A6NJR5 290 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 GOLGA8BA8MQT2 603 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 BOLA2-SMG1P6H3BVE0 249 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 ARVCFO00192 962 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 PQBP1O60828 265 aaKnown RBP6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 PFDN1O60925 122 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 ENTPD5O75356 428 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 ASGR1P07306 291 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 VDRP11473 427 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 HNRNPH3P31942 346 aaKnown RBP6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 CYLC1P35663 651 aaPredicted RBP6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 CDK7P50613 346 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 USP11P51784 963 aa6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 IFI35P80217 286 aaPredicted RBP6.84□□□□□ -1.31
AC009404.1-201ENST00000420330 NTRK3Q16288 839 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms