RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 VAV2P52735 878 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 EEF1DP3Q658K8 133 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 SND1Q7KZF4 910 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 NME8Q8N427 588 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CEP120Q8N960 986 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 A0A1W2PQJ5 194 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 ACKR2O00590 384 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CALUO43852 315 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 AKAP3O75969 853 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 FNTAP49354 379 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CRYBB1P53674 252 aaPredicted RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 ZBED6P86452 979 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 MGAT3Q09327 533 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 CATSPER4Q7RTX7 472 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 FAM228AQ86W67 206 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 OTUD6BQ8N6M0 293 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 GPATCH11Q8N954 259 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 MRPL4Q9BYD3 311 aaKnown RBP13.85□□□□□ -0.19
LINC00642-201ENST00000419459 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TTYH3Q9C0H2 523 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 HSPBP1Q9NZL4 362 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 KCNG1Q9UIX4 513 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TRPV2Q9Y5S1 764 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 ALPK3Q96L96 1907 aa13.85□□□□□ -0.19
LINC00642-201ENST00000419459 TRIP11Q15643 1979 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 TACC1O75410 805 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 ACOT2P49753 483 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 PSEN1P49768 467 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 OSTNP61366 133 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 EDRF1Q3B7T1 1238 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 KDM7AQ6ZMT4 941 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
LINC00642-201ENST00000419459 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 CNOT6LQ96LI5 555 aaKnown RBP13.84□□□□□ -0.19
LINC00642-201ENST00000419459 PRMT7Q9NVM4 692 aaPredicted RBP13.84□□□□□ -0.19
LINC00642-201ENST00000419459 MAGEC2Q9UBF1 373 aaPredicted RBP13.84□□□□□ -0.19
LINC00642-201ENST00000419459 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
LINC00642-201ENST00000419459 CNTNAP2Q9UHC6 1331 aa13.84□□□□□ -0.19
LINC00642-201ENST00000419459 CLDN3O15551 220 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 EXOC3O60645 756 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
LINC00642-201ENST00000419459 ZNF568Q3ZCX4 644 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 TRAF7Q6Q0C0 670 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CBWD2Q8IUF1 395 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 NHEJ1Q9H9Q4 299 aaPredicted RBP13.83□□□□□ -0.2
LINC00642-201ENST00000419459 STIM2Q9P246 746 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 MROH7Q68CQ1 1323 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 H0YHG0 523 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 ABLIM1O14639 778 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CHUKO15111 745 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 TOM1L1O75674 476 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 ZMYND10O75800 440 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CD52P31358 61 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 TNFSF9P41273 254 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CCL23P55773 120 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 SPA17Q15506 151 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 FBXW10Q5XX13 1052 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CD302Q8IX05 232 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
LINC00642-201ENST00000419459 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 SPATA4Q8NEY3 305 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 SCLYQ96I15 445 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 FAM84AQ96KN4 292 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 FAM213AQ9BRX8 229 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 EPN3Q9H201 632 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 ST3GAL5Q9UNP4 418 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 HES2Q9Y543 173 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
LINC00642-201ENST00000419459 TANC1Q9C0D5 1861 aa13.82□□□□□ -0.2
LINC00642-201ENST00000419459 TMCO5BA8MYB1 307 aa13.82□□□□□ -0.2
LINC00642-201ENST00000419459 DCDC2CA8MYV0 355 aa13.82□□□□□ -0.2
LINC00642-201ENST00000419459 CETN3O15182 167 aa13.82□□□□□ -0.2
LINC00642-201ENST00000419459 PIGRP01833 764 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms