RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 EOMESO95936 686 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 THPOP40225 353 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 CHMP4BP1P59074 171 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 BIRC3Q13489 604 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 CUL2Q13617 745 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 DSC3Q14574 896 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 TMEM132DQ14C87 1099 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 NAB2Q15742 525 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 PTPN21Q16825 1174 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 DPH6Q7L8W6 267 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 BEST2Q8NFU1 509 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 SLC30A5Q8TAD4 765 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 TMEM40Q8WWA1 233 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 SEMA4DQ92854 862 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 APBB2Q92870 758 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 ZNF333Q96JL9 665 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 PPP1R13BQ96KQ4 1090 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 SNX27Q96L92 541 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 SYT11Q9BT88 431 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 UNC93B1Q9H1C4 597 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
HMGA1P6-201ENST00000418454 EVI5O60447 810 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 NPTXRO95502 500 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 CXCL8P10145 99 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 CKBP12277 381 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 SELPP16109 830 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 KIF11P52732 1056 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 VAV2P52735 878 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 FAM189BP81408 668 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 PTK2Q05397 1052 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 KIF5AQ12840 1032 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 MYO1EQ12965 1108 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 PAK2Q13177 524 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 TRIM72Q6ZMU5 477 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 FAM126BQ8IXS8 530 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 OR5B17Q8NGF7 314 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 CXorf38Q8TB03 319 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 SPATA18Q8TC71 538 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 SH3TC2Q8TF17 1288 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 NIF3L1Q9GZT8 377 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 XYLT2Q9H1B5 865 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 ELAC1Q9H777 363 aaKnown RBP10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 RGS18Q9NS28 235 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 DPP3Q9NY33 737 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 PADI3Q9ULW8 664 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 GINS2Q9Y248 185 aa10.86□□□□□ -0.67
HMGA1P6-201ENST00000418454 A0A0A6YYK5 440 aaPredicted RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 KIF5CO60282 957 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 PAEPP09466 180 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 HSPA8P11142 646 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 HARSP12081 509 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 LRPAP1P30533 357 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 RPL9P32969 192 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 RFC2P35250 354 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 MAGEA1P43355 309 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 GJA8P48165 433 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 NOP14P78316 857 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 TFAMQ00059 246 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 GOLGA8FQ08AF8 430 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 GOLGA8DPQ0D2H9 430 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 LPIN1Q14693 890 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 IFI16Q16666 785 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 TDRD12Q587J7 1177 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 ZNF667Q5HYK9 610 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 TWF2Q6IBS0 349 aaKnown RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 JADE1Q6IE81 842 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 TOGARAM2Q6ZUX3 1019 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 ARHGEF19Q8IW93 802 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 EFCAB13Q8IY85 973 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 UBR7Q8N806 425 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 C1orf127Q8N9H9 656 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 VCPIP1Q96JH7 1222 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 ZNF668Q96K58 619 aaPredicted RBP10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 KREMEN1Q96MU8 473 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 DEFB118Q96PH6 123 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 AGPAT1Q99943 283 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 BCO2Q9BYV7 579 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 MTMR12Q9C0I1 747 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 SNTG2Q9NY99 539 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 NENFQ9UMX5 172 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 IPPQ9Y573 584 aa10.85□□□□□ -0.67
HMGA1P6-201ENST00000418454 PCDHA13Q9Y5I0 950 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms