RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 TRPM8Q7Z2W7 1104 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 ADAM22Q9P0K1 906 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 UVRAGQ9P2Y5 699 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 EIF4E1BA6NMX2 242 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 A8MUI8 341 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 CHUKO15111 745 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 P4HA2O15460 535 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 GAS8O95995 478 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 IRX3P78415 501 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 IZUMO3Q5VZ72 239 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 SPOCK2Q92563 424 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 PXMP2Q9NR77 195 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 TP73O15350 636 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 DRG2P55039 364 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 FKBP1AP62942 108 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 BRDTQ58F21 947 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 CCDC91Q7Z6B0 441 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 C4orf19Q8IY42 314 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 SNF8Q96H20 258 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 NINJ2Q9NZG7 142 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 ATXN2Q99700 1313 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 NR3C2P08235 984 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 PRKCEQ02156 737 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 ALCAMQ13740 583 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 P3H1Q32P28 736 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 VSTM1Q6UX27 236 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 C4orf33Q8N1A6 199 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 DCLK3Q9C098 648 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF148Q9UQR1 794 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
LIMK1-202ENST00000418310 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 MUTP22033 750 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 GPC3P51654 580 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 OSTNP61366 133 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 FASTKD3Q14CZ7 662 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 TDRD10Q5VZ19 366 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 IWS1Q96ST2 819 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 SAYSD1Q9NPB0 183 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 GNA15P30679 374 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 POLGP54098 1239 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 MYBPC2Q14324 1141 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF526Q8TF50 670 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 RUNDC3BQ96NL0 473 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
LIMK1-202ENST00000418310 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
LIMK1-202ENST00000418310 FSCN2O14926 492 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 GGPS1O95749 300 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 CDC25CP30307 473 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ELF3P78545 371 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ORC1Q13415 861 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 TAS1R3Q7RTX0 852 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 MOV10L1Q9BXT6 1211 aaKnown RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 OSBPL8Q9BZF1 889 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 LRRC19Q9H756 370 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 VPS37BQ9H9H4 285 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIMK1-202ENST00000418310 MYPNQ86TC9 1320 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 WDR91A4D1P6 747 aa12.64□□□□□ -0.39
LIMK1-202ENST00000418310 RASA4BC9J798 803 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms