RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 CLEC1BQ9P126 229 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 HPSEQ9Y251 543 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 IRAK3Q9Y616 596 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 GRXCR2A6NFK2 248 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 TEX28O15482 410 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 GLUD1P00367 558 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 RPN1P04843 607 aaKnown RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 MYL1P05976 194 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 SPATA31D3P0C874 917 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 GARTP22102 1010 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 ADSSP30520 456 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 CYP2J2P51589 502 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 GUCY2FP51841 1108 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 COL19A1Q14993 1142 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 PSMD5Q16401 504 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 RTP2Q5QGT7 225 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 RARS2Q5T160 578 aaKnown RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 KIAA0319Q5VV43 1072 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 KANK3Q6NY19 840 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 PDXDC1Q6P996 788 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 DSTYKQ6XUX3 929 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 SPATA31D4Q6ZUB0 917 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 GPD1LQ8N335 351 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 CBWD1Q9BRT8 395 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 STRA6Q9BX79 667 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 DZANK1Q9NVP4 752 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 RBAKQ9NYW8 714 aaPredicted RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
TM9SF4-203ENST00000417389 STYXL1Q9Y6J8 313 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 A0A0C4DFX4 3053 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 CUL9Q8IWT3 2517 aa12□□□□□ -0.49
TM9SF4-203ENST00000417389 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 SPTBN5Q9NRC6 3674 aaKnown RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 REV3LO60673 3130 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 CLIC2O15247 247 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 MEFVO15553 781 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 MBTPS2O43462 519 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 EXTL3O43909 919 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 FAM189A1O60320 539 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 CLSTN1O94985 981 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 IL18RAPO95256 599 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 NFICP08651 508 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 TKTP29401 623 aaKnown RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 ARPP19P56211 112 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 TFAMQ00059 246 aaKnown RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 C12orf76Q8N812 135 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 ZNF507Q8TCN5 953 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 FBXL18Q96ME1 805 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 TSPAN18Q96SJ8 248 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 ASB7Q9H672 318 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 MAN1C1Q9NR34 630 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 DPP7Q9UHL4 492 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 USP15Q9Y4E8 981 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 UBE4BO95155 1302 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
TM9SF4-203ENST00000417389 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 CITO14578 2027 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 FAM237AA0A1B0GTK4 181 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 KIAA0391O15091 583 aaKnown RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 LILRB3O75022 631 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 KRT19P08727 400 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 WEE2P0C1S8 567 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 CYP3A5P20815 502 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 CLCN4P51793 760 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 FAM160A1Q05DH4 1040 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 PSMD2Q13200 908 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 KNOP1Q1ED39 458 aaKnown RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 TMC5Q6UXY8 1006 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 ANKS3Q6ZW76 656 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 USP37Q86T82 979 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 RNF168Q8IYW5 571 aaPredicted RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 TMEM130Q8N3G9 435 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 SMRP1Q8NCR6 262 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 CACTINQ8WUQ7 758 aaKnown RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 SCFD1Q8WVM8 642 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 PIK3R5Q8WYR1 880 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 MSLNLQ96KJ4 702 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 RXFP1Q9HBX9 757 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 AGPAT3Q9NRZ7 376 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 DPP3Q9NY33 737 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 HSPBP1Q9NZL4 362 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 DERAQ9Y315 318 aa11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 TCF20Q9UGU0 1960 aaKnown RBP11.98□□□□□ -0.49
TM9SF4-203ENST00000417389 TCHHQ07283 1943 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms