RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
RPS28-201ENST00000417088 POTEHQ6S545 545 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 MPZL3Q6UWV2 235 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 DTHD1Q6ZMT9 781 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 C1orf210Q8IVY1 113 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 ZNF461Q8TAF7 563 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 ING5Q8WYH8 240 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
RPS28-201ENST00000417088 KXD1Q9BQD3 176 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 NTPCRQ9BSD7 190 aaKnown RBP16.23■□□□□ 0.19
RPS28-201ENST00000417088 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
RPS28-201ENST00000417088 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 CNTN3Q9P232 1028 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 MYH15Q9Y2K3 1946 aa16.23■□□□□ 0.19
RPS28-201ENST00000417088 KANSL1LA0AUZ9 987 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 ARHGEF37A1IGU5 675 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 WDR27A2RRH5 827 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 SP9P0CG40 484 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 GUCY2CP25092 1073 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 MRPL58Q14197 206 aaKnown RBP16.22■□□□□ 0.19
RPS28-201ENST00000417088 MLF2Q15773 248 aaPredicted RBP16.22■□□□□ 0.19
RPS28-201ENST00000417088 SLC5A9Q2M3M2 681 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 C18orf25Q96B23 403 aaPredicted RBP16.22■□□□□ 0.19
RPS28-201ENST00000417088 MCRS1Q96EZ8 462 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
RPS28-201ENST00000417088 ZNF292O60281 2723 aa16.22■□□□□ 0.19
RPS28-201ENST00000417088 SYN3O14994 580 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 SEC24AO95486 1093 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 LMNAP02545 664 aaKnown RBP16.21■□□□□ 0.19
RPS28-201ENST00000417088 HARSP12081 509 aaKnown RBP16.21■□□□□ 0.19
RPS28-201ENST00000417088 ELF1P32519 619 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 RPL9P32969 192 aaKnown RBP16.21■□□□□ 0.19
RPS28-201ENST00000417088 ARPP19P56211 112 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 PFKPQ01813 784 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 PRKCQQ04759 706 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 SLC10A6Q3KNW5 377 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 HYIQ5T013 277 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 SPIRE2Q8WWL2 714 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 PNMA5Q96PV4 448 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 TIPINQ9BVW5 301 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 MTF2Q9Y483 593 aaPredicted RBP16.21■□□□□ 0.19
RPS28-201ENST00000417088 NUB1Q9Y5A7 615 aa16.21■□□□□ 0.19
RPS28-201ENST00000417088 COL4A3Q01955 1670 aa16.21■□□□□ 0.18
RPS28-201ENST00000417088 H7C4K7 107 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 PRRG1O14668 218 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 ECI2O75521 394 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 TOM1L1O75674 476 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 LRG1P02750 347 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 PLS3P13797 630 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 ATF2P15336 505 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 CEBPBP17676 345 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 PTPN2P17706 415 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
RPS28-201ENST00000417088 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
RPS28-201ENST00000417088 SEZ6Q53EL9 994 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 TCEAL8Q8IYN2 117 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 MAML2Q8IZL2 1156 aaPredicted RBP16.2■□□□□ 0.18
RPS28-201ENST00000417088 SYT2Q8N9I0 419 aaPredicted RBP16.2■□□□□ 0.18
RPS28-201ENST00000417088 TMEM161BQ8NDZ6 487 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 SUSD3Q96L08 255 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 PLA2G2FQ9BZM2 168 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 GDE1Q9NZC3 331 aa16.2■□□□□ 0.18
RPS28-201ENST00000417088 OTOGLQ3ZCN5 2332 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 FAM170BA6NMN3 283 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 MAPTP10636 758 aaKnown RBP16.19■□□□□ 0.18
RPS28-201ENST00000417088 CD72P21854 359 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 FOXK2Q01167 660 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 STRN3Q13033 797 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPS28-201ENST00000417088 UBXN2BQ14CS0 331 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 CTXN3Q4LDR2 81 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 PRSS36Q5K4E3 855 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 TANGO2Q6ICL3 276 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 ZPBP2Q6X784 338 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 KCTD17Q8N5Z5 321 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 PLIN2Q99541 437 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 CORO1BQ9BR76 489 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 BCO2Q9BYV7 579 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 OSBPL6Q9BZF3 934 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 CYP4F11Q9HBI6 524 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 ANKFY1Q9P2R3 1169 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 CITO14578 2027 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 GPR179Q6PRD1 2367 aa16.19■□□□□ 0.18
RPS28-201ENST00000417088 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 MCM4P33991 863 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 ID4P47928 161 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 SMTNP53814 917 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 SLC12A3P55017 1021 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 MCL1Q07820 350 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 TPGS2Q68CL5 300 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 ZC3H14Q6PJT7 736 aaKnown RBP16.18■□□□□ 0.18
RPS28-201ENST00000417088 DDX12PQ92771 950 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 ELSPBP1Q96BH3 223 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 TCEAL4Q96EI5 215 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms