RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 GTF2IRD2BQ6EKJ0 949 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 NFRKBQ6P4R8 1299 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 DCLRE1AQ6PJP8 1040 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 KLHL17Q6TDP4 642 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PIWIL3Q7Z3Z3 882 aaKnown RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 THAP5Q7Z6K1 395 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 TTC7BQ86TV6 843 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 GTF2IRD2Q86UP8 949 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT73Q86Y46 540 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC117Q8IWD4 279 aaPredicted RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CCDC13Q8IYE1 715 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 ZZZ3Q8IYH5 903 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PHACTR4Q8IZ21 702 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 HDDC3Q8N4P3 179 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 ARHGEF39Q8N4T4 335 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 AOPEPQ8N6M6 819 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 POMGNT2Q8NAT1 580 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PLBD2Q8NHP8 589 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 SUN5Q8TC36 379 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 NEK9Q8TD19 979 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 AFG1LQ8WV93 481 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CASP10Q92851 521 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PTP4A1Q93096 173 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 SDCCAG3Q96C92 435 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 TUBGCP3Q96CW5 907 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 EID2BQ96D98 161 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 GIMAP5Q96F15 307 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 SUCLG2Q96I99 432 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 MSLNLQ96KJ4 702 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CEP295NLQ96MC4 621 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC39A3Q9BRY0 314 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 TBCDQ9BTW9 1192 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 UTP14AQ9BVJ6 771 aaKnown RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT23Q9C075 422 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 IQCGQ9H095 443 aaKnown RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 NKX2-4Q9H2Z4 354 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 MMADHCQ9H3L0 296 aaPredicted RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 MID1IP1Q9NPA3 183 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 SEPT11Q9NVA2 429 aaKnown RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 QPCTLQ9NXS2 382 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 TAB2Q9NYJ8 693 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 AKAP7Q9P0M2 348 aaPredicted RBP3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 STK26Q9P289 416 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 MYO1AQ9UBC5 1043 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 ADGRE2Q9UHX3 823 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 FEM1BQ9UK73 627 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PRDM4Q9UKN5 801 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 CAMK2AQ9UQM7 478 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 ATP11BQ9Y2G3 1177 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 KLHL20Q9Y2M5 609 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 PCDHB12Q9Y5F1 795 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 N6AMT1Q9Y5N5 214 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 LYVE1Q9Y5Y7 322 aa3.39□□□□□ -1.87
CTDSPL-203ENST00000416688 ASXL2Q76L83 1435 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ARHGAP10A1A4S6 786 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 LRRIQ4A6NIV6 560 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 K7EPI3 171 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SH2B2O14492 632 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 KIAA0355O15063 1070 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PGRMC2O15173 223 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 VILLO15195 856 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ARHGAP6O43182 974 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MMP20O60882 483 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SASH3O75995 380 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CSPG5O95196 566 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TRIM16O95361 564 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 YEATS4O95619 227 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CKMP06732 381 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DLDP09622 509 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 HNRNPA1P09651 372 aaKnown RBP eCLIP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SKILP12757 684 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 LAMP2P13473 410 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 OSMP13725 252 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 BRAFP15056 766 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM11P17152 192 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PTPN2P17706 415 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 PTPRAP18433 802 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CD247P20963 164 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 SFPQP23246 707 aaKnown RBP eCLIP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 KELP23276 732 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 CD40P25942 277 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TPP2P29144 1249 aaPredicted RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ACSL1P33121 698 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 GRK5P34947 590 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 GP5P40197 560 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ECI1P42126 302 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 DPP6P42658 865 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 TXKP42681 527 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 MAGEA8P43361 318 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 AFMP43652 599 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ATP5OP48047 213 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 NT5C2P49902 561 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 FXR1P51114 621 aaKnown RBP eCLIP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 BCAR1P56945 870 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 GMFBP60983 142 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 ACTR2P61160 394 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 COPS2P61201 443 aa3.38□□□□□ -1.87
CTDSPL-203ENST00000416688 RAB1AP62820 205 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms