RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CHMP2BQ9UQN3 213 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 NUMBLQ9Y6R0 609 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 ANKRD62A6NC57 917 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 PALM3A6NDB9 673 aaPredicted RBP15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CCDC22O60826 627 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CETN2P41208 172 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 INHBCP55103 352 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 KCNA1Q09470 495 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 LRRC36Q1X8D7 754 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 WDR72Q3MJ13 1102 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CLNKQ7Z7G1 428 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 ABTB1Q969K4 478 aaPredicted RBP15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 CENPKQ9BS16 269 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 COA1Q9GZY4 146 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 ARL8BQ9NVJ2 186 aa15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 DDX25Q9UHL0 483 aaKnown RBP15.62■□□□□ 0.09
NCKIPSD-204ENST00000416649 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 MIF4GDA9UHW6 222 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ECE2O60344 883 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 EDF1O60869 148 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 NR3C1P04150 777 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 CYP11B2P19099 503 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 RPA3P35244 121 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 AP1B1Q10567 949 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 PABPC4Q13310 644 aaKnown RBP eCLIP15.61■□□□□ 0.094e-10■■■■□ 23.7
NCKIPSD-204ENST00000416649 PABPC1LQ4VXU2 614 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 SYNCQ9H7C4 482 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ALG13Q9NP73 1137 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 KRT82Q9NSB4 513 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 GRID1Q9ULK0 1009 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 MROH7Q68CQ1 1323 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 EXOC1LA0A1B0GW35 172 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 POTEFA5A3E0 1075 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ASMTLO95671 621 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ANXA13P27216 316 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 STAT3P40763 770 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 PPP4CP60510 307 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 LIN52Q52LA3 116 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 TMEM63BQ5T3F8 832 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 FYB2Q5VWT5 728 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 POTEEQ6S8J3 1075 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 OTOAQ7RTW8 1153 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 RBM12BQ8IXT5 1001 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ARHGAP18Q8N392 663 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 BTBD10Q9BSF8 475 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 LARSQ9P2J5 1176 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ADGRA3Q8IWK6 1321 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 GSC2O15499 205 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 HAUS5O94927 633 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 GCNT3O95395 438 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 FAM163BP0C2L3 166 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ALAS1P13196 640 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 SESTD1Q86VW0 696 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 FAM161BQ96MY7 647 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 SMC6Q96SB8 1091 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 ASCC2Q9H1I8 757 aaPredicted RBP15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 TRABDQ9H4I3 376 aa15.61■□□□□ 0.09
NCKIPSD-204ENST00000416649 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 CALUO43852 315 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 ATF2P15336 505 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 MAGEA10P43363 369 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 TMEM62Q0P6H9 643 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 SEPT7Q16181 437 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 FOXR2Q6PJQ5 311 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 RIBC1Q8N443 379 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 SH3TC2Q8TF17 1288 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 SNF8Q96H20 258 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 DNAJC1Q96KC8 554 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 CHST7Q9NS84 486 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 HEY2Q9UBP5 337 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 AKR1B1P15121 316 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 AMPD1P23109 780 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 ADCY7P51828 1080 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 BPIFB4P59827 614 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC1A5Q15758 541 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 EAPPQ56P03 285 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 RHOT2Q8IXI1 618 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 RDH13Q8NBN7 331 aa15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 DDX27Q96GQ7 796 aaKnown RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 PRR11Q96HE9 360 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 FBXO6Q9NRD1 293 aaPredicted RBP15.6■□□□□ 0.09
NCKIPSD-204ENST00000416649 TP73O15350 636 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 DESP17661 470 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 PIK3CAP42336 1068 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 MAGEA8P43361 318 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 PKN2Q16513 984 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 PLEKHG4Q58EX7 1191 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms