RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 CYP4F11Q9HBI6 524 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
LINC01238-201ENST00000416204 PPME1Q9Y570 386 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 VWA8A3KMH1 1905 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
LINC01238-201ENST00000416204 ARID2Q68CP9 1835 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 F5P12259 2224 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 C1QTNF9BB2RNN3 333 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 K7ESF4 209 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 CPLX1O14810 134 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 C1QTNF9P0C862 333 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 SPINK2P20155 84 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 ELF1P32519 619 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 ELAVL2Q12926 359 aaKnown RBP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 PCBP1Q15365 356 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 PDZD4Q76G19 769 aaPredicted RBP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 MAP4K3Q8IVH8 894 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 TMEM130Q8N3G9 435 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 DAGLBQ8NCG7 672 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 ZSCAN18Q8TBC5 510 aaPredicted RBP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 BSNDQ8WZ55 320 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 IRF7Q92985 503 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 KIFC3Q9BVG8 833 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 SLITRK6Q9H5Y7 841 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 POLR3BQ9NW08 1133 aaPredicted RBP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
LINC01238-201ENST00000416204 TICRRQ7Z2Z1 1910 aa10.33□□□□□ -0.76
LINC01238-201ENST00000416204 SDK1Q7Z5N4 2213 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 ZNF263O14978 683 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 LRP3O75074 770 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 MOSPD3O75425 235 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 DGAT1O75907 488 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 DEXIO95424 95 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 POU2F2P09086 479 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 PSMC3P17980 439 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 RARRES1P49788 294 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 CDR1P51861 262 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 KPNA1P52294 538 aaPredicted RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 OSTNP61366 133 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 SOX4Q06945 474 aaPredicted RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 PRPF4BQ13523 1007 aaKnown RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 TOB2Q14106 344 aaPredicted RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 TEAD2Q15562 447 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 TCEAL6Q6IPX3 200 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 PDXDC1Q6P996 788 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 TXNDC11Q6PKC3 985 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 C12orf50Q8NA57 414 aaPredicted RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 SMARCD2Q92925 531 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 TCEAL3Q969E4 200 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 PRMT7Q9NVM4 692 aaPredicted RBP10.32□□□□□ -0.76
LINC01238-201ENST00000416204 INSL5Q9Y5Q6 135 aa10.32□□□□□ -0.76
LINC01238-201ENST00000416204 NBEAQ8NFP9 2946 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 COL4A2P08572 1712 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ARHGEF37A1IGU5 675 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 HEPACAM2A8MVW5 462 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 GIPC1O14908 333 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 N4BP3O15049 544 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 EXTL3O43909 919 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 TOP3BO95985 862 aaKnown RBP10.31□□□□□ -0.76
LINC01238-201ENST00000416204 FOSBP53539 338 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 POU5F1BQ06416 359 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 TWF1Q12792 350 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PTGDRQ13258 359 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PON2Q15165 354 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 STXBP5Q5T5C0 1151 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 CYP4A22Q5TCH4 519 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 STPG1Q5TH74 334 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PPP4R3AQ6IN85 833 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PSAPL1Q6NUJ1 521 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PKN3Q6P5Z2 889 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ANKS3Q6ZW76 656 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 KBTBD6Q86V97 674 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ZBTB8OSQ8IWT0 167 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 YAF2Q8IY57 180 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 SPEM1Q8N4L4 309 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 CEP120Q8N960 986 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 CSGALNACT1Q8TDX6 532 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 PPP1R10Q96QC0 940 aaKnown RBP10.31□□□□□ -0.76
LINC01238-201ENST00000416204 HSD17B14Q9BPX1 270 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 NFKBIZQ9BYH8 718 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 AGXT2Q9BYV1 514 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 FZD8Q9H461 694 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ANKEF1Q9NU02 776 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 CEP72Q9P209 647 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ZMIZ1Q9ULJ6 1067 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 BACE2Q9Y5Z0 518 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 AKAP13Q12802 2813 aa10.31□□□□□ -0.76
LINC01238-201ENST00000416204 ANKRD11Q6UB99 2663 aaPredicted RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ZMYM2Q9UBW7 1377 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ARNTLO00327 626 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 WNT7AO00755 349 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ZNF197O14709 1029 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 CDC45O75419 566 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ABLIM3O94929 683 aa10.3□□□□□ -0.76
LINC01238-201ENST00000416204 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 GCFC2P16383 781 aaKnown RBP10.3□□□□□ -0.76
LINC01238-201ENST00000416204 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms