RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CARD9Q9H257 536 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SPC25Q9HBM1 224 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 SUN2Q9UH99 717 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 FRMPD1Q5SYB0 1578 aa13.61□□□□□ -0.23
SCN1B-202ENST00000415950 FOXP2O15409 715 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SOX11P35716 441 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 TFDP2Q14188 446 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 C1orf228Q6PIY5 440 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 RHOT1Q8IXI2 618 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 BBS5Q8N3I7 341 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 KAT2BQ92831 832 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 RMDN3Q96TC7 470 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 POLR3CQ9BUI4 534 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 IKZF4Q9H2S9 585 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 RPF1Q9H9Y2 349 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 CTNNAL1Q9UBT7 734 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 CHMP2BQ9UQN3 213 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 H3BRJ5 948 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 NTSR2O95665 410 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 ATP6V1G2O95670 118 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 TMEM253P0C7T8 217 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 CCND1P24385 295 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 MAGEA4P43358 317 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 AP2B1P63010 937 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 QPCTQ16769 361 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SLC13A5Q86YT5 568 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 PARD3BQ8TEW8 1205 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 FAM81BQ96LP2 452 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 GPRC5CQ9NQ84 441 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SLC9A2Q9UBY0 812 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 VWDEQ8N2E2 1590 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 B2RBV5 119 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 FBXO33Q7Z6M2 555 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 OLA1Q9NTK5 396 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 HSPBP1Q9NZL4 362 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 KLRC4O43908 158 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 CALCAP01258 141 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 KCNA3P22001 575 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 KPNA2P52292 529 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
SCN1B-202ENST00000415950 HIF1AQ16665 826 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 SEZ6Q53EL9 994 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 C3orf62Q6ZUJ4 267 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 FAM129AQ9BZQ8 928 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 USP20Q9Y2K6 914 aa13.6□□□□□ -0.23
SCN1B-202ENST00000415950 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 NDUFB10O96000 172 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 TYK2P29597 1187 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 KCNJ2P63252 427 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 TMEM179Q6ZVK1 233 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 ANO5Q75V66 913 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 DHX38Q92620 1227 aaKnown RBP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 KRT35Q92764 455 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 SLC5A5Q92911 643 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 CEP19Q96LK0 163 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 MID2Q9UJV3 735 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 TRIM33Q9UPN9 1127 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 SYCE1LA8MT33 242 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 AGPSO00116 658 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 XPOTO43592 962 aaKnown RBP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 BCAR1P56945 870 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 NSUN2Q08J23 767 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 NR1H3Q13133 447 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 SWSAP1Q6NVH7 229 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 FOXO6A8MYZ6 492 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 KRT4P19013 534 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN1B-202ENST00000415950 PRAMEP78395 509 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 SLC20A2Q08357 652 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 CUL3Q13618 768 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 CCDC33Q8N5R6 958 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 ACAP3Q96P50 834 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
SCN1B-202ENST00000415950 PBX1P40424 430 aa13.58□□□□□ -0.23
SCN1B-202ENST00000415950 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.23
SCN1B-202ENST00000415950 FAXCQ5TGI0 409 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms