RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 NCDNQ9UBB6 729 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 RNF7Q9UBF6 113 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 EIF2B4Q9UI10 523 aaKnown RBP3.41□□□□□ -1.86
LINC00428-201ENST00000415620 STXBP5LQ9Y2K9 1186 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 KIF1BO60333 1816 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 CEP162Q5TB80 1403 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
LINC00428-201ENST00000415620 ANKRD30BQ9BXX2 1392 aa3.4□□□□□ -1.86
LINC00428-201ENST00000415620 LPXNO60711 386 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 HKR1P10072 659 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 HNRNPLP14866 589 aaKnown RBP eCLIP3.4□□□□□ -1.87
LINC00428-201ENST00000415620 KCNA3P22001 575 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 FAM189BP81408 668 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 MTERF2Q49AM1 385 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 TMEM177Q53S58 311 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 ZC3H12BQ5HYM0 836 aaKnown RBP3.4□□□□□ -1.87
LINC00428-201ENST00000415620 IQSEC1Q6DN90 963 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 SLFN12LQ6IEE8 588 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 KANSL1Q7Z3B3 1105 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 LILRA3Q8N6C8 439 aaPredicted RBP3.4□□□□□ -1.87
LINC00428-201ENST00000415620 C2orf69Q8N8R5 385 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 SIMC1Q8NDZ2 872 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 OR52N2Q8NGI0 321 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 TRIM55Q9BYV6 548 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 CPEB1Q9BZB8 566 aaKnown RBP3.4□□□□□ -1.87
LINC00428-201ENST00000415620 RRP7BPQ9NSQ0 103 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 NDOR1Q9UHB4 597 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 PFDN2Q9UHV9 154 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 DNAI1Q9UI46 699 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 EPN1Q9Y6I3 576 aaPredicted RBP3.4□□□□□ -1.87
LINC00428-201ENST00000415620 UNC79Q9P2D8 2635 aa3.4□□□□□ -1.87
LINC00428-201ENST00000415620 CACNA1SQ13698 1873 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 FER1L6Q2WGJ9 1857 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 USP34Q70CQ2 3546 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 A0A0A6YYJ9 748 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 TCRBV16S1A1N1A0A5B0 115 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 UBA6A0AVT1 1052 aaPredicted RBP3.39□□□□□ -1.87
LINC00428-201ENST00000415620 HOXA3O43365 443 aaPredicted RBP3.39□□□□□ -1.87
LINC00428-201ENST00000415620 CFBP00751 764 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 TCF3P15923 654 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 MAP2K2P36507 400 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 PTH2RP49190 550 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 BCAR1P56945 870 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 MYBPC3Q14896 1274 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 TTC38Q5R3I4 469 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 CTU1Q7Z7A3 348 aaKnown RBP3.39□□□□□ -1.87
LINC00428-201ENST00000415620 IGSF22Q8N9C0 903 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 C9orf106Q8NAJ2 232 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 PPP1R14CQ8TAE6 165 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 CAGE1Q8TC20 777 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 MAGEB10Q96LZ2 347 aaPredicted RBP3.39□□□□□ -1.87
LINC00428-201ENST00000415620 LRFN3Q9BTN0 628 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 SLC29A3Q9BZD2 475 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 OSBPL6Q9BZF3 934 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 IGSF5Q9NSI5 407 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 CHST2Q9Y4C5 530 aa3.39□□□□□ -1.87
LINC00428-201ENST00000415620 CPDO75976 1380 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 NSD2O96028 1365 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 RNASET2O00584 256 aaKnown RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 ONECUT2O95948 504 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 SEC24CP53992 1094 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 FOXF2Q12947 444 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 FOXI1Q12951 378 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 EPHA7Q15375 998 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 ARHGAP44Q17R89 818 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 FAM214AQ32MH5 1076 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 TOM1L2Q6ZVM7 507 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 GPRIN1Q7Z2K8 1008 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 BRAPQ7Z569 592 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 FGD2Q7Z6J4 655 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 SRRM1Q8IYB3 904 aaKnown RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 DEFB123Q8N688 67 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 SLC9A6Q92581 669 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 DCLRE1CQ96SD1 692 aaKnown RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 CPPED1Q9BRF8 314 aaPredicted RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 SOX7Q9BT81 388 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 NDC1Q9BTX1 674 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 LSM14BQ9BX40 385 aaKnown RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 PRO3102Q9H379 93 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 ACSS2Q9NR19 701 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 CCNL1Q9UK58 526 aaPredicted RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 KMT2BQ9UMN6 2715 aaPredicted RBP3.38□□□□□ -1.87
LINC00428-201ENST00000415620 LTN1O94822 1766 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 GPRASP1Q5JY77 1395 aa3.38□□□□□ -1.87
LINC00428-201ENST00000415620 TTC28Q96AY4 2481 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 GAGE12BA1L429 117 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 GAGE12HA6NDE8 117 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 DNAJC9-AS1A6NH13 148 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 EXOC5O00471 708 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 KRT37O76014 449 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 DDNO94850 711 aaPredicted RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 APPP05067 770 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 GAAP10253 952 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 BMPR1AP36894 532 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 ABCG1P45844 678 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 KIF11P52732 1056 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 BLOC1S1P78537 153 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms