RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 FAM13AO94988 1023 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 NASPP49321 788 aaPredicted RBP22.33■■□□□ 1.16
PTPRU-203ENST00000415600 CEBPZQ03701 1054 aaKnown RBP22.33■■□□□ 1.16
PTPRU-203ENST00000415600 UVSSAQ2YD98 709 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 TAS1R3Q7RTX0 852 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 GPBP1Q86WP2 473 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 CEP120Q8N960 986 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 ZNF707Q96C28 371 aaPredicted RBP22.33■■□□□ 1.16
PTPRU-203ENST00000415600 CNTN3Q9P232 1028 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 MTRRQ9UBK8 725 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 BACE2Q9Y5Z0 518 aa22.33■■□□□ 1.16
PTPRU-203ENST00000415600 TBCAO75347 108 aaKnown RBP22.32■■□□□ 1.16
PTPRU-203ENST00000415600 LETM1O95202 739 aaPredicted RBP22.32■■□□□ 1.16
PTPRU-203ENST00000415600 C8AP07357 584 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 MRE11P49959 708 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 RAB33AQ14088 237 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 LRSAM1Q6UWE0 723 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 PARVGQ9HBI0 331 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 PLXNA3P51805 1871 aa22.32■■□□□ 1.16
PTPRU-203ENST00000415600 SYCE3A1L190 88 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 H7C4K7 107 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 PODXLO00592 558 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 SYN3O14994 580 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 OR1D2P34982 312 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 TXLNAP40222 546 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 SF3A1Q15459 793 aaKnown RBP22.31■■□□□ 1.16
PTPRU-203ENST00000415600 MYCT1Q8N699 235 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 CXCL16Q9H2A7 254 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 PLEKHA5Q9HAU0 1116 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 DUSP12Q9UNI6 340 aa22.31■■□□□ 1.16
PTPRU-203ENST00000415600 MTCL1Q9Y4B5 1905 aaKnown RBP22.31■■□□□ 1.16
PTPRU-203ENST00000415600 CLTAP09496 248 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 FSHRP23945 695 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 LIG4P49917 911 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 NCKAP1LP55160 1127 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 MCL1Q07820 350 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 GET4Q7L5D6 327 aaPredicted RBP22.3■■□□□ 1.16
PTPRU-203ENST00000415600 HAUS6Q7Z4H7 955 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 KCNN1Q92952 543 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 CCDC39Q9UFE4 941 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 CLIC4Q9Y696 253 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 C2orf16Q68DN1 1984 aa22.3■■□□□ 1.16
PTPRU-203ENST00000415600 HNRNPDLO14979 420 aaKnown RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 XPOTO43592 962 aaKnown RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 POU2F2P09086 479 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 DHX8Q14562 1220 aaKnown RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 AXDND1Q5T1B0 1012 aaPredicted RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 KCNG4Q8TDN1 519 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 TSPAN18Q96SJ8 248 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 REEP2Q9BRK0 252 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 GRPEL1Q9HAV7 217 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 GOLGA2P5Q9HBQ8 144 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 POLIQ9UNA4 740 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 CDY1Q9Y6F8 540 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 MYH11P35749 1972 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 K7ENM7 598 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 ABLIM1O14639 778 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 PLCG1P19174 1290 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 RFX1P22670 979 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 TKTP29401 623 aaKnown RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 ELF1P32519 619 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 STK38Q15208 465 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 IER5LQ5T953 404 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 ASTLQ6HA08 431 aaPredicted RBP22.29■■□□□ 1.16
PTPRU-203ENST00000415600 APPL2Q8NEU8 664 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 SLC7A14Q8TBB6 771 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 RAD54LQ92698 747 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 ZHX3Q9H4I2 956 aa22.29■■□□□ 1.16
PTPRU-203ENST00000415600 NPHP3-ACAD11A0A0J9YXS1 232 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 LAMP2P13473 410 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 CLCN5P51795 746 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 VCPP55072 806 aaKnown RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 CACNB1Q02641 598 aaPredicted RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 PPP2R3AQ06190 1150 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 ARSHQ5FYA8 562 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 KRI1Q8N9T8 703 aaKnown RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 PRSS33Q8NF86 280 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 FEZF2Q8TBJ5 459 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 LARP4BQ92615 738 aaKnown RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 ZBTB45Q96K62 511 aaPredicted RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 ZMAT2Q96NC0 199 aaKnown RBP22.28■■□□□ 1.16
PTPRU-203ENST00000415600 CCSER1Q9C0I3 900 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 TBX20Q9UMR3 447 aa22.28■■□□□ 1.16
PTPRU-203ENST00000415600 MARCKSP29966 332 aaPredicted RBP22.27■■□□□ 1.16
PTPRU-203ENST00000415600 SOX4Q06945 474 aaPredicted RBP22.27■■□□□ 1.16
PTPRU-203ENST00000415600 KARSQ15046 597 aaKnown RBP22.27■■□□□ 1.16
PTPRU-203ENST00000415600 GRASPQ7Z6J2 395 aaPredicted RBP22.27■■□□□ 1.16
PTPRU-203ENST00000415600 ALYREFQ86V81 257 aaKnown RBP22.27■■□□□ 1.16
PTPRU-203ENST00000415600 MYADMQ96S97 322 aa22.27■■□□□ 1.16
PTPRU-203ENST00000415600 CITO14578 2027 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 SPTLC2O15270 562 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 N4BP1O75113 896 aaKnown RBP22.26■■□□□ 1.15
PTPRU-203ENST00000415600 PDGFBP01127 241 aaPredicted RBP22.26■■□□□ 1.15
PTPRU-203ENST00000415600 BRCC3P46736 316 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 ME1P48163 572 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 ZNF131P52739 623 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 SLC39A14Q15043 492 aa22.26■■□□□ 1.15
PTPRU-203ENST00000415600 VARS2Q5ST30 1063 aaKnown RBP22.26■■□□□ 1.15
PTPRU-203ENST00000415600 ADALQ6DHV7 355 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms