RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ITPKCQ96DU7 683 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 P2RX7Q99572 595 aaKnown RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 AMNQ9BXJ7 453 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 SCHIP1Q9P0W5 487 aaPredicted RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 TTC7AQ9ULT0 858 aaPredicted RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 RGS2P41220 211 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 HERVK_113P62684 666 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 ESX1Q8N693 406 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 GABPB2Q8TAK5 448 aaPredicted RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 GAB3Q8WWW8 586 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 SCG3Q8WXD2 468 aaKnown RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 SLC38A10Q9HBR0 1119 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 GIT1Q9Y2X7 761 aa21.66■■□□□ 1.06
AP1S3-205ENST00000415298 GPC6Q9Y625 555 aaPredicted RBP21.66■■□□□ 1.06
AP1S3-205ENST00000415298 SPDYE16A6NNV3 312 aaPredicted RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 FBP2O00757 339 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CBFA2T3O75081 653 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 OAS1P00973 400 aaKnown RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CYP2C9P11712 490 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 KRT83P78385 493 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 GRM1Q13255 1194 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 RGMBQ6NW40 437 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CAPN12Q6ZSI9 719 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 RASAL3Q86YV0 1011 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 TRMT44Q8IYL2 757 aaKnown RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 PPP1R14CQ8TAE6 165 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 MDM1Q8TC05 714 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 BRI3BPQ8WY22 251 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 ZMYND12Q9H0C1 365 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 PARVBQ9HBI1 364 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 SH3GLB2Q9NR46 395 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 GGT7Q9UJ14 662 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 AGTPBP1Q9UPW5 1226 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 USP15Q9Y4E8 981 aaPredicted RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 TLL2Q9Y6L7 1015 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CCL15-CCL14A0A0B4J2E2 113 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 TMEM88BA6NKF7 163 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 HEXIM1O94992 359 aaKnown RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 UBTFL6P0CB48 400 aaPredicted RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CTNNA1P35221 906 aaKnown RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 ITGA9Q13797 1035 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 CCL15Q16663 113 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 LRRC8CQ8TDW0 803 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 SKA1Q96BD8 255 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 PTPN18Q99952 460 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 ASCC2Q9H1I8 757 aaPredicted RBP21.65■■□□□ 1.06
AP1S3-205ENST00000415298 DPH5Q9H2P9 285 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 NOX1Q9Y5S8 564 aa21.65■■□□□ 1.06
AP1S3-205ENST00000415298 SMIM31A0A1B0GVY4 71 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 SLC26A4O43511 780 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 STAM2O75886 525 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 PAFAH1B1P43034 410 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 CTAG1AP78358 180 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 TRIM14Q14142 442 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 KLHL35Q6PF15 583 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 Q6ZNX1 250 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 FAM186BQ8IYM0 893 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 TTC30BQ8N4P2 665 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 OR2W6PQ8NHA6 318 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 SEZ6LQ9BYH1 1024 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 RXFP1Q9HBX9 757 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 NDUFA13Q9P0J0 144 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 MTUS1Q9ULD2 1270 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 HPSEQ9Y251 543 aa21.64■■□□□ 1.06
AP1S3-205ENST00000415298 H0Y3Z8 333 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 ZCCHC18P0CG32 403 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 TKTP29401 623 aaKnown RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 HOXA7P31268 230 aaPredicted RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 KRT2P35908 639 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 USP6NLQ92738 828 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 DNAJC1Q96KC8 554 aaKnown RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 ZIC5Q96T25 663 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 CHP1Q99653 195 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 DDX50Q9BQ39 737 aaKnown RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 HGH1Q9BTY7 390 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 TMEM260Q9NX78 707 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 RIPK3Q9Y572 518 aa21.64■■□□□ 1.05
AP1S3-205ENST00000415298 COL11A1P12107 1806 aaPredicted RBP21.64■■□□□ 1.05
AP1S3-205ENST00000415298 LOC285556D6RIA3 1793 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 FBXO21O94952 628 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 CYP2C8P10632 490 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 TCP1P17987 556 aaKnown RBP21.63■■□□□ 1.05
AP1S3-205ENST00000415298 UBE2SQ16763 222 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 USP17L6PQ6QN14 398 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 BLIDQ8IZY5 108 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 LRRC45Q96CN5 670 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 CCDC134Q9H6E4 229 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 ETNK1Q9HBU6 452 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 AASDHPPTQ9NRN7 309 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 HOMER2Q9NSB8 354 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 PNMA3Q9UL41 463 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 PCDHA4Q9UN74 947 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 ADAMTS5Q9UNA0 930 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 PCDHB2Q9Y5E7 798 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 ESYT3A0FGR9 886 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 O00370 1275 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 TEX28O15482 410 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 SUN1O94901 812 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 ZBTB48P10074 688 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms