RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 CTNND2Q9UQB3 1225 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 PIRO00625 290 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 FGF18O76093 207 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
ATG4B-207ENST00000415107 ITGB1P05556 798 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 EPB41P11171 864 aaKnown RBP12.9□□□□□ -0.34
ATG4B-207ENST00000415107 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-207ENST00000415107 CASP4P49662 377 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 BFSP1Q12934 665 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
ATG4B-207ENST00000415107 SASS6Q6UVJ0 657 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-207ENST00000415107 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 MED15Q96RN5 788 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 FNBP1Q96RU3 617 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 BPIFA3Q9BQP9 254 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 ITGA11Q9UKX5 1188 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
ATG4B-207ENST00000415107 SF3B1O75533 1304 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATG4B-207ENST00000415107 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 PODXLO00592 558 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 KIF4AO95239 1232 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
ATG4B-207ENST00000415107 GTF2H1P32780 548 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 CLCNKBP51801 687 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 KRT17Q04695 432 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 GPM6BQ13491 265 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 CEP135Q66GS9 1140 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 CD300LGQ6UXG3 332 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 C15orf39Q6ZRI6 1047 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 CSGALNACT2Q8N6G5 542 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 C1orf127Q8N9H9 656 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 ENOX1Q8TC92 643 aaKnown RBP12.89□□□□□ -0.35
ATG4B-207ENST00000415107 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 NOC3LQ8WTT2 800 aaKnown RBP12.89□□□□□ -0.35
ATG4B-207ENST00000415107 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 C18orf25Q96B23 403 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-207ENST00000415107 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 PAAF1Q9BRP4 392 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 VRTNQ9H8Y1 702 aa12.89□□□□□ -0.35
ATG4B-207ENST00000415107 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 FSCN2O14926 492 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 SYN3O14994 580 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 PMM2O15305 246 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 CAVIN2O95810 425 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 SOD2P04179 222 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 PNPLA4P41247 253 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 OR1G1P47890 313 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 VAMP7P51809 220 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 TYRO3Q06418 890 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 CAMK1Q14012 370 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 PTPROQ16827 1216 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 THAP9Q9H5L6 903 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
ATG4B-207ENST00000415107 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 PRG3Q9Y2Y8 225 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-207ENST00000415107 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 M0QZQ0 153 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 GRM6O15303 877 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 STX10O60499 249 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 B3GAT3O94766 335 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 C1RP00736 705 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 TNNC2P02585 160 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 C4BPAP04003 597 aaKnown RBP12.87□□□□□ -0.35
ATG4B-207ENST00000415107 CTSAP10619 480 aa12.87□□□□□ -0.35
ATG4B-207ENST00000415107 KRT13P13646 458 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms