RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 SMIM28A0A1B0GU29 152 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 A0A1W2PQJ5 194 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 KIAA0355O15063 1070 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 TNNC2P02585 160 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 PNMA6AP0CW24 399 aaPredicted RBP10.44□□□□□ -0.74
RIF1-202ENST00000414861 ITGA4P13612 1032 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 KRT9P35527 623 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 GSDMDP57764 484 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 MYL6P60660 151 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 SOX4Q06945 474 aaPredicted RBP10.44□□□□□ -0.74
RIF1-202ENST00000414861 CETN1Q12798 172 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 SEPT8Q92599 483 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 NAA15Q9BXJ9 866 aaKnown RBP10.44□□□□□ -0.74
RIF1-202ENST00000414861 APOBEC3GQ9HC16 384 aaKnown RBP10.44□□□□□ -0.74
RIF1-202ENST00000414861 LRRC53A6NM62 1247 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 PPEF2O14830 753 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 PHACTR2O75167 634 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 ITGB3P05106 788 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 KCNE1P15382 129 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 AP3M2P53677 418 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 ZBTB6Q15916 424 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 SLC24A5Q71RS6 500 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 RRAGAQ7L523 313 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 LRRC8AQ8IWT6 810 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 CD302Q8IX05 232 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 CCDC150Q8NCX0 1101 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 TATDN2Q93075 761 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 ARID3AQ99856 593 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 FTHL17Q9BXU8 183 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 GOLGA2P5Q9HBQ8 144 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 ABHD10Q9NUJ1 306 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 CACNG4Q9UBN1 327 aa10.44□□□□□ -0.74
RIF1-202ENST00000414861 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
RIF1-202ENST00000414861 ARL5CA6NH57 179 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 TIMP1P01033 207 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 NOP14P78316 857 aaKnown RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 ZBED6P86452 979 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 RAPGEF1Q13905 1077 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 PDXDC1Q6P996 788 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 CACNA2D4Q7Z3S7 1137 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 TMEM139Q8IV31 216 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 CNGA4Q8IV77 575 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 HELQQ8TDG4 1101 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 KREMEN1Q96MU8 473 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 DNAJC7Q99615 494 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 GPR88Q9GZN0 384 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 MIOSQ9NXC5 875 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 FBXL5Q9UKA1 691 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 ENPP3O14638 875 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 PARNO95453 639 aaKnown RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 ASS1P00966 412 aaKnown RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 KRT19P08727 400 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 TPM1P09493 284 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 CSF2RAP15509 400 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 POLR2BP30876 1174 aaKnown RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 SCNN1GP51170 649 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 JAM2P57087 298 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 FAM189BP81408 668 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 CCZ1BP86790 482 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 CCZ1P86791 482 aaPredicted RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 NT5DC4Q86YG4 428 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 PPM1KQ8N3J5 372 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 APBB2Q92870 758 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 NT5C1BQ96P26 610 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 RSAD1Q9HA92 442 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 UBE2TQ9NPD8 197 aaPredicted RBP10.43□□□□□ -0.74
RIF1-202ENST00000414861 DPP3Q9NY33 737 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 GIT1Q9Y2X7 761 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 DERAQ9Y315 318 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 NUB1Q9Y5A7 615 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
RIF1-202ENST00000414861 CEP290O15078 2479 aa10.43□□□□□ -0.74
RIF1-202ENST00000414861 FNDC1Q4ZHG4 1894 aaPredicted RBP10.42□□□□□ -0.74
RIF1-202ENST00000414861 FGFR1P11362 822 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 RAG1P15918 1043 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 NAB2Q15742 525 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 CLLU1OSQ5K130 101 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 WDR59Q6PJI9 974 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 IQCDQ96DY2 449 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 PANX2Q96RD6 677 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 C1orf112Q9NSG2 853 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 INPP5FQ9Y2H2 1132 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 PTPRSQ13332 1948 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 F8VZ95 297 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 CLSTN1O94985 981 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 SKIP12755 728 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 TRPC3Q13507 836 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 DRAP1Q14919 205 aaPredicted RBP10.42□□□□□ -0.74
RIF1-202ENST00000414861 ARHGAP44Q17R89 818 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 ZNF699Q32M78 642 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 OR8K1Q8NGG5 319 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 RPS6KC1Q96S38 1066 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 EDEM3Q9BZQ6 932 aa10.42□□□□□ -0.74
RIF1-202ENST00000414861 ITGA11Q9UKX5 1188 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms