RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CLDN10P78369 228 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 MLLT1Q03111 559 aaPredicted RBP14.17□□□□□ -0.14
CNOT4-204ENST00000414802 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
CNOT4-204ENST00000414802 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
CNOT4-204ENST00000414802 ZNF280BQ86YH2 543 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 NAP1L5Q96NT1 182 aaPredicted RBP14.17□□□□□ -0.14
CNOT4-204ENST00000414802 SLC9A7Q96T83 725 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 NDST4Q9H3R1 872 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 TMEM8AQ9HCN3 771 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 IFNKQ9P0W0 207 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 UBQLN1Q9UMX0 589 aaKnown RBP14.17□□□□□ -0.14
CNOT4-204ENST00000414802 DERAQ9Y315 318 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 ATG2AQ2TAZ0 1938 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 LGALS16A8MUM7 142 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 TEX33O43247 280 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 LRRN2O75325 713 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 DDHD2O94830 711 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 VNN1O95497 513 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 ITGB3P05106 788 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 TPM2P07951 284 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 KCNA4P22459 653 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 ZBTB6Q15916 424 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 DUOXA2Q1HG44 320 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 SV2AQ7L0J3 742 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 TRAPPC11Q7Z392 1133 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 BEST2Q8NFU1 509 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 TAS1R2Q8TE23 839 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 PAAF1Q9BRP4 392 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 CRACR2AQ9BSW2 395 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 ZBED2Q9BTP6 218 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 DPP3Q9NY33 737 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 DNAJB4Q9UDY4 337 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 SIX4Q9UIU6 781 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 LAMA3Q16787 3333 aa14.17□□□□□ -0.14
CNOT4-204ENST00000414802 STX10O60499 249 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 PHACTR2O75167 634 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 CLSTN1O94985 981 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 GJB5O95377 273 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 HLA-DRAP01903 254 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 C4BPAP04003 597 aaKnown RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 KRT19P08727 400 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 POLR2BP30876 1174 aaKnown RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 PBX3P40426 434 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 PIK3CAP42336 1068 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 RABGGTBP53611 331 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 UBASH3AP57075 661 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 ENPEPQ07075 957 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 ZACNQ401N2 412 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 KRT39Q6A163 491 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 NT5DC4Q86YG4 428 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 LRRC43Q8N309 656 aa14.16□□□□□ -0.14
CNOT4-204ENST00000414802 CACTINQ8WUQ7 758 aaKnown RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 ZNF689Q96CS4 500 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 XPO4Q9C0E2 1151 aaKnown RBP14.16□□□□□ -0.14
CNOT4-204ENST00000414802 MYH10P35580 1976 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 LCHNA4D1U4 455 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 F8W810 466 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 ZC3H11AO75152 810 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 IGFBP6P24592 240 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 GTF2H1P32780 548 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 KLK7P49862 253 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 TUSC3Q13454 348 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 BTG3Q14201 252 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 CXorf38Q8TB03 319 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 SEMA4DQ92854 862 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 FAM193BQ96PV7 902 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 PI4K2AQ9BTU6 479 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 MRPL9Q9BYD2 267 aaKnown RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 SLC38A7Q9NVC3 462 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 AGAP1Q9UPQ3 857 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 MRPL42Q9Y6G3 142 aaKnown RBP14.15□□□□□ -0.14
CNOT4-204ENST00000414802 MYO7AQ13402 2215 aa14.15□□□□□ -0.14
CNOT4-204ENST00000414802 TLL1O43897 1013 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 N4BP1O75113 896 aaKnown RBP14.14□□□□□ -0.15
CNOT4-204ENST00000414802 CLCNKBP51801 687 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 HTRA4P83105 476 aaPredicted RBP14.14□□□□□ -0.15
CNOT4-204ENST00000414802 APBA1Q02410 837 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 UBXN1Q04323 297 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 DSC1Q08554 894 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 NCOA4Q13772 614 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 GSE1Q14687 1217 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 FILIP1LQ4L180 1135 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 EPC2Q52LR7 807 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 C9orf57Q5W0N0 161 aa14.14□□□□□ -0.15
CNOT4-204ENST00000414802 COLGALT2Q8IYK4 626 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms