RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 BASP1P80723 227 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SP3Q02447 781 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RUNX1T1Q06455 604 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 AP1B1Q10567 949 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 AIMP1Q12904 312 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PIN1Q13526 163 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SEPT6Q14141 434 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 NAA30Q147X3 362 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SAFBQ15424 915 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ZRSR1Q15695 479 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SHROOM1Q2M3G4 852 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LETM2Q2VYF4 491 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF792Q3KQV3 632 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 Q4G0T1 1027 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LRRC23Q53EV4 343 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SETMARQ53H47 684 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HECTD3Q5T447 861 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 METTL11BQ5VVY1 283 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 FAM109BQ6ICB4 259 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SULT6B1Q6IMI4 303 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 NEK5Q6P3R8 708 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF790Q6PG37 636 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CORO6Q6QEF8 472 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 XKR5Q6UX68 686 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 MFSD6Q6ZSS7 791 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF765Q7L2R6 523 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LPCAT2Q7L5N7 544 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 VN1R5Q7Z5H4 357 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 KIAA0907Q7Z7F0 614 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ZER1Q7Z7L7 766 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 TBC1D1Q86TI0 1168 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LUZP1Q86V48 1076 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 VSIG1Q86XK7 387 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CEP57Q86XR8 500 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RAB11FIP4Q86YS3 637 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PASD1Q8IV76 773 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ITPRIPQ8IWB1 547 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RPAP2Q8IXW5 612 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SP8Q8IXZ3 490 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 C10orf67Q8IYJ2 551 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 FAM26EQ8N5C1 309 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LSMEM1Q8N8F7 131 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 C1orf127Q8N9H9 656 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SUPT20HQ8NEM7 779 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PJA1Q8NG27 643 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 OR52K2Q8NGK3 314 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CEP70Q8NHQ1 597 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RFWD2Q8NHY2 731 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 FNIP1Q8TF40 1166 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 BCL7CQ8WUZ0 217 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SGCDQ92629 289 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HDAC2Q92769 488 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CLP1Q92989 425 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ATP6V0A1Q93050 837 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 MIEF2Q96C03 454 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RBM17Q96I25 401 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 MTMR9Q96QG7 549 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 C7orf25Q9BPX7 421 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 THUMPD2Q9BTF0 503 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LSM14BQ9BX40 385 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 STK31Q9BXU1 1019 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 FOXP3Q9BZS1 431 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ELAC1Q9H777 363 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HPS4Q9NQG7 708 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 TBC1D22BQ9NU19 505 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 OBP2AQ9NY56 170 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 NKIRAS2Q9NYR9 191 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 IL20Q9NYY1 176 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CXXC1Q9P0U4 656 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CROTQ9UKG9 612 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ATP6V1DQ9Y5K8 247 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SNCAIPQ9Y6H5 919 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 LAMB1P07942 1786 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 GAKO14976 1311 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ABCC4O15439 1325 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 UBN2Q6ZU65 1347 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF646O15015 1829 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 MANSC4A6NHS7 340 aaPredicted RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 GOLGA8AA7E2F4 631 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 PI4K2BG5E9Z4 385 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 EBAG9O00559 213 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 APAF1O14727 1248 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 LSM1O15116 133 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 STX6O43752 255 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 RANBP6O60518 1105 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 DGKIO75912 1065 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 DNTTP04053 509 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 GJB1P08034 283 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ADH5P11766 374 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 RLBP1P12271 317 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 TRIM27P14373 513 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 RPS2P15880 293 aaKnown RBP4.26□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF3P17036 446 aa4.26□□□□□ -1.73
LINC01048-201ENST00000414480 IL13P35225 146 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms