RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NAA16Q6N069 864 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SLC30A6Q6NXT4 461 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 C8orf74Q6P047 294 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CENPQQ7L2Z9 268 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 EPM2AIP1Q7L775 607 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TAOK1Q7L7X3 1001 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 STRA8Q7Z7C7 330 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MRPL10Q7Z7H8 261 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 GALNT7Q86SF2 657 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CDH24Q86UP0 819 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 LSMEM2Q8N112 164 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 LRRC47Q8N1G4 583 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PDCL2Q8N4E4 241 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MFSD2AQ8NA29 543 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PCYOX1LQ8NBM8 494 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 BBOF1Q8ND07 529 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ANKRD20A12PQ8NF67 263 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 OR52K1Q8NGK4 314 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 USP13Q92995 863 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SLC35B4Q969S0 331 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 FERMT2Q96AC1 680 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SDCCAG3Q96C92 435 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CLIP3Q96DZ5 547 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SGCZQ96LD1 299 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 UBXN10Q96LJ8 280 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MTMR9Q96QG7 549 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PIGSQ96S52 555 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PPP1R9BQ96SB3 815 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 FSD1Q9BTV5 496 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SPON2Q9BUD6 331 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 WDR12Q9GZL7 423 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 XYLT2Q9H1B5 865 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MIR1-1HGQ9H1L0 117 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 LIN28AQ9H9Z2 209 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 RSAD1Q9HA92 442 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 GRPEL1Q9HAV7 217 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CRLF2Q9HC73 371 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PDLIM7Q9NR12 457 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 C1orf112Q9NSG2 853 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SPATS2LQ9NUQ6 558 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 OGFRQ9NZT2 677 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TBC1D14Q9P2M4 693 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 DDX20Q9UHI6 824 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TRHDEQ9UKU6 1024 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 GIT1Q9Y2X7 761 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 POLR3KQ9Y2Y1 108 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 KDM2BQ8NHM5 1336 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PEG3Q9GZU2 1588 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 AATKQ6ZMQ8 1374 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DNAJC25-GNG10A0A024R161 153 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TTC34A8MYJ7 566 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 UPK3BL1B0FP48 263 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 UPK3BL2E5RIL1 263 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 L7N2F9 121 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SMAD7O15105 426 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SPOPO43791 374 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SRGAP2O75044 1071 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GLRX3O76003 335 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ENDOD1O94919 500 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CSPG5O95196 566 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 POP4O95707 220 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TBC1D8O95759 1140 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CBX7O95931 251 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TBX18O95935 607 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 F13A1P00488 732 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PLATP00750 562 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PDHA1P08559 390 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 EPB41P11171 864 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CKBP12277 381 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PECAM1P16284 738 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF3P17036 446 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ENDOUP21128 410 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 LPOP22079 712 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 RPL13P26373 211 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GBP2P32456 591 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 KRT9P35527 623 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ABCG1P45844 678 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PSMD7P51665 324 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 MNAT1P51948 309 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 KPNA1P52294 538 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 B2MP61769 119 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DCAF7P61962 342 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DR1Q01658 176 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TRAP1Q12931 704 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GTF2H3Q13889 308 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 FRG1Q14331 258 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 ODF1Q14990 250 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TERF2Q15554 542 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 CFAP100Q494V2 611 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DCAF17Q5H9S7 520 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 SYDE2Q5VT97 1194 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 TCERG1LQ5VWI1 586 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 NAIF1Q69YI7 327 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 HEATR6Q6AI08 1181 aaKnown RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 GPR139Q6DWJ6 353 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 RAB12Q6IQ22 244 aa3.94□□□□□ -1.78
SF3B1-203ENST00000414174 DRICH1Q6PGQ1 229 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-203ENST00000414174 PPP1R21Q6ZMI0 780 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms