RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 DSC2Q02487 901 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ZBTB16Q05516 673 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 RING1Q06587 406 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 DMTNQ08495 405 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 EPS8Q12929 822 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 SLC14A1Q13336 389 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 MYBPC3Q14896 1274 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 NAA25Q14CX7 972 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 POU4F3Q15319 338 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 KYNUQ16719 465 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 DUSP28Q4G0W2 176 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 MEX3CQ5U5Q3 659 aaKnown RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ANGEL2Q5VTE6 544 aaKnown RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 E4F1Q66K89 784 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 CCDC62Q6P9F0 684 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 CCDC117Q8IWD4 279 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 AGBL5Q8NDL9 886 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ETNPPLQ8TBG4 499 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 SH3RF3Q8TEJ3 882 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 CTNNBL1Q8WYA6 563 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 MAML1Q92585 1016 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 HSPH1Q92598 858 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 KRT35Q92764 455 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 PTP4A1Q93096 173 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 RNF125Q96EQ8 232 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF764Q96H86 408 aaPredicted RBP6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 GSDMAQ96QA5 445 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ALPK1Q96QP1 1244 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 TWNKQ96RR1 684 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 WDR18Q9BV38 432 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 TNMDQ9H2S6 317 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 GPAMQ9HCL2 828 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 PDE7BQ9NP56 450 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 KIF3AQ9Y496 699 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 NUP160Q12769 1436 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 GRIN2AQ12879 1464 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 LMTK3Q96Q04 1460 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 CUX1P39880 1505 aa6.39□□□□□ -1.39
CBX1P3-201ENST00000413296 KRT87PA6NCN2 255 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PTGES3LE9PB15 166 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 H3BNC9 293 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 H3BUI4 141 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 RNF225M0QZC1 329 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ARNTLO00327 626 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 CASQ2O14958 399 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SGTAO43765 313 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ZBTB14O43829 449 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SYNCRIPO60506 623 aaKnown RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 EIF4EBP3O60516 100 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KLHL41O60662 606 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KERAO60938 352 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SEC22BO75396 215 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 BBOX1O75936 387 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 LPLP06858 475 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ITGA2BP08514 1039 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PDE6AP16499 860 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ABCD3P28288 659 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 EEF1DP29692 281 aaKnown RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 GRK3P35626 688 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 THPOP40225 353 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 RGS2P41220 211 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 AARSP49588 968 aaKnown RBP eCLIP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 TKTL1P51854 596 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PPP5CP53041 499 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PRKAA2P54646 552 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 EMP3P54852 163 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 CABP4P57796 275 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 DLG4P78352 724 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 NKX6-1P78426 367 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SPEM2Q0P670 501 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 AIMP1Q12904 312 aaKnown RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 COASYQ13057 564 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KCNAB2Q13303 367 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 IFI16Q16666 785 aaKnown RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SHROOM1Q2M3G4 852 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KIF4BQ2VIQ3 1234 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 C2orf76Q3KRA6 126 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PPM1JQ5JR12 505 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KLHL24Q6TFL4 600 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 PXKQ7Z7A4 578 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ADSSL1Q8N142 457 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 TTC39CQ8N584 583 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KCNG4Q8TDN1 519 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ZFAND2BQ8WV99 257 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 USP6NLQ92738 828 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 KAT5Q92993 513 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 NEIL1Q96FI4 390 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SLC35A4Q96G79 324 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 VPS39Q96JC1 886 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 UIMC1Q96RL1 719 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 LACRTQ9GZZ8 138 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 RNPEPQ9H4A4 650 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 SOX17Q9H6I2 414 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 TMEM8AQ9HCN3 771 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 GPRC5CQ9NQ84 441 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms