RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZBTB5O15062 677 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 NKRFO15226 690 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 EFEMP2O95967 443 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 CFBP00751 764 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TIMP1P01033 207 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MYL3P08590 195 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TXNP10599 105 aaKnown RBP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MAPK8P45983 427 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MCM2P49736 904 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 CPT1AP50416 773 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 ANTXR2P58335 489 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 FPGSQ05932 587 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 DMTNQ08495 405 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TRAF1Q13077 416 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 ITGA7Q13683 1181 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 PPP2R5BQ15173 497 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 ZSCAN23Q3MJ62 389 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 BRDTQ58F21 947 aaPredicted RBP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 C9orf50Q5SZB4 431 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TAF3Q5VWG9 929 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 CATIPQ7Z7H3 387 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 HOMER1Q86YM7 354 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 FAM126BQ8IXS8 530 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MB21D2Q8IYB1 491 aaPredicted RBP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 RETREG2Q8NC44 543 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MYRIPQ8NFW9 859 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 OR6J1Q8NGC5 347 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 IGDCC4Q8TDY8 1250 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 NSUN6Q8TEA1 469 aaKnown RBP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 SCFD2Q8WU76 684 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 MTMR8Q96EF0 704 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TAAR1Q96RJ0 339 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 PIGSQ96S52 555 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
LINC00342-201ENST00000412393 SPTLC3Q9NUV7 552 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 COL20A1Q9P218 1284 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 KLHL14Q9P2G3 628 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 TBX21Q9UL17 535 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 PCDHB5Q9Y5E4 795 aa6.03□□□□□ -1.44
LINC00342-201ENST00000412393 SSU72P8A0A1W2PR75 194 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 C1QTNF3-AMACRE9PGA6 284 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PRC1O43663 620 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PRICKLE3O43900 615 aaPredicted RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PPP1R11O60927 126 aaPredicted RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 LRRN2O75325 713 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CDC45O75419 566 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 DDAH1O94760 285 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CD4P01730 458 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 ZSCAN20P17040 1043 aaPredicted RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PLCG1P19174 1290 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 MAPK1P28482 360 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 HSD17B4P51659 736 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 EPHB4P54760 987 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SLURP1P55000 103 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PSMC6P62333 389 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 TROAPQ12815 778 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CBX2Q14781 532 aaPredicted RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SYCP1Q15431 976 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 STXBP2Q15833 593 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SLC35G1Q2M3R5 365 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 ARHGEF16Q5VV41 709 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CREB3L3Q68CJ9 461 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 MFSD5Q6N075 450 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CCDC62Q6P9F0 684 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CASC1Q6TDU7 716 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SEPT14Q6ZU15 432 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 Q7L0L9 218 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 ZNF654Q8IZM8 581 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 DEFB123Q8N688 67 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SLC43A3Q8NBI5 491 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 COPS5Q92905 334 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 CCDC74BQ96LY2 380 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 IWS1Q96ST2 819 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 MTG1Q9BT17 334 aaPredicted RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 SEZ6LQ9BYH1 1024 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 RIOX1Q9H6W3 641 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 LY9Q9HBG7 655 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PXMP2Q9NR77 195 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 MAP3K20Q9NYL2 800 aaKnown RBP6.02□□□□□ -1.45
LINC00342-201ENST00000412393 PCDHA1Q9Y5I3 950 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 TET1Q8NFU7 2136 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 TANC1Q9C0D5 1861 aa6.02□□□□□ -1.45
LINC00342-201ENST00000412393 GRIN2DO15399 1336 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 CCDC69A6NI79 296 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 SH2B2O14492 632 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 FFAR3O14843 346 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 CYTH3O43739 400 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 B4GALT4O60513 344 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 BUB1BO60566 1050 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 KPNA6O60684 536 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 LETM1O95202 739 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 ARIH2O95376 493 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 GH1P01241 217 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TPM3P06753 285 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 POLR2MP0CAP2 368 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 MYCLP12524 364 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 PFKLP17858 780 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 HOXA13P31271 388 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms