RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
CLINT1-201ENST00000411809 ARHGAP28Q9P2N2 729 aa13.91□□□□□ -0.18
CLINT1-201ENST00000411809 GCLMP48507 274 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 FMO1Q01740 532 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 BAATQ14032 418 aaPredicted RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CRYMQ14894 314 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 TRIM68Q6AZZ1 485 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 TTC27Q6P3X3 843 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 IWS1Q96ST2 819 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 ACP6Q9NPH0 428 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SLC12A4Q9UP95 1085 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 POLR2AP24928 1970 aaKnown RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 GH1P01241 217 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CYP1A2P05177 515 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 KRT16P08779 473 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 PEX3P56589 373 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CCDC137Q6PK04 289 aaKnown RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 PIGWQ7Z7B1 504 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 ERICH1Q86X53 443 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 RASAL2Q9UJF2 1139 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 SGPL1O95470 568 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 NR3C2P08235 984 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 ATP4AP20648 1035 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CCNHP51946 323 aaPredicted RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CATSPERGQ6ZRH7 1159 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 TMEM8AQ9HCN3 771 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 HOMER2Q9NSB8 354 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
CLINT1-201ENST00000411809 PCDHA10Q9Y5I2 948 aa13.9□□□□□ -0.18
CLINT1-201ENST00000411809 CCDC189A1A4V9 331 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ZBED4O75132 1171 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 NQO1P15559 274 aaKnown RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CTNNA2P26232 953 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CNGA1P29973 690 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CCND2P30279 289 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 NCALDP61601 193 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 SIX1Q15475 284 aaPredicted RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 FAM47EQ6ZV65 393 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 PRELID2Q8N945 189 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 TMEM120BA0PK00 339 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ENO4A6NNW6 628 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ASAP2O43150 1006 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 RTN2O75298 545 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 RARAP10276 462 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 SP2Q02086 613 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 P3H4Q92791 437 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 NSRP1Q9H0G5 558 aaKnown RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 GRHL1Q9NZI5 618 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CLGNO14967 610 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 SNX3O60493 162 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 STAM2O75886 525 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ICAM3P32942 547 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 PTGIRP43119 386 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
CLINT1-201ENST00000411809 CNGA2Q16280 664 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 SPDYCQ5MJ68 293 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 ZFYVE27Q5T4F4 411 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 PHLDB2Q86SQ0 1253 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 EXOC3L1Q86VI1 746 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 PGM2Q96G03 612 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 KIFC3Q9BVG8 833 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
CLINT1-201ENST00000411809 MYPNQ86TC9 1320 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 PIGRP01833 764 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 RNASELQ05823 741 aaKnown RBP13.88□□□□□ -0.19
CLINT1-201ENST00000411809 CYP1B1Q16678 543 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 ARHGEF16Q5VV41 709 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
CLINT1-201ENST00000411809 C1orf54Q8WWF1 131 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
CLINT1-201ENST00000411809 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
CLINT1-201ENST00000411809 RIPK2O43353 540 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms