RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 TLE6Q9H808 572 aa25.87■■□□□ 1.73
UBE2E3-202ENST00000410062 STK39Q9UEW8 545 aa25.87■■□□□ 1.73
UBE2E3-202ENST00000410062 SF3B1O75533 1304 aaKnown RBP eCLIP25.87■■□□□ 1.733e-6■■■■■ 36
UBE2E3-202ENST00000410062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 C2orf71A6NGG8 1288 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 ZNF233A6NK53 670 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 TMEM189-UBE2V1I3L0A0 370 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 PDXKO00764 312 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 XPOTO43592 962 aaKnown RBP25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 RPL9P32969 192 aaKnown RBP25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 BMS1Q14692 1282 aaKnown RBP25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 SPATA1Q5VX52 437 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 EFCAB13Q8IY85 973 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 XXYLT1Q8NBI6 393 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 PPP2R3CQ969Q6 453 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 FBXL18Q96ME1 805 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 PDE11AQ9HCR9 933 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 MAN1B1Q9UKM7 699 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 DERAQ9Y315 318 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 C2CD2LO14523 706 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 CYP3A5P20815 502 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 PTPN14Q15678 1187 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 SNRNP35Q16560 246 aaKnown RBP25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 BEST2Q8NFU1 509 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 KIAA1586Q9HCI6 787 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 C2CD2Q9Y426 696 aa25.86■■□□□ 1.73
UBE2E3-202ENST00000410062 I3L4J1 428 aa25.85■■□□□ 1.73
UBE2E3-202ENST00000410062 LRPAP1P30533 357 aa25.85■■□□□ 1.73
UBE2E3-202ENST00000410062 PRCPP42785 496 aa25.85■■□□□ 1.73
UBE2E3-202ENST00000410062 BRCC3P46736 316 aa25.85■■□□□ 1.73
UBE2E3-202ENST00000410062 MRPL17Q9NRX2 175 aaKnown RBP25.85■■□□□ 1.73
UBE2E3-202ENST00000410062 EXOC3O60645 756 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 URODP06132 367 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 GLUD2P49448 558 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 USP41Q3LFD5 358 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 FAM171A1Q5VUB5 890 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 KIAA1841Q6NSI8 718 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 FAM84AQ96KN4 292 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 CHST7Q9NS84 486 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 TRAF3IP3Q9Y228 551 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 IRAK3Q9Y616 596 aa25.84■■□□□ 1.73
UBE2E3-202ENST00000410062 BRWD1Q9NSI6 2320 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 GOLGA6L22H0YM25 854 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 BIN1O00499 593 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 LINC01565O15544 149 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 CALUO43852 315 aaPredicted RBP25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 NR3C1P04150 777 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 TFAMQ00059 246 aaKnown RBP25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 DUSP6Q16828 381 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 KIAA0319Q5VV43 1072 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 EP400NLQ6ZTU2 488 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 CEP57Q86XR8 500 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 DMAC2Q9NW81 257 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 NUB1Q9Y5A7 615 aa25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.83■■□□□ 1.73
UBE2E3-202ENST00000410062 PPEF2O14830 753 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 LILRB3O75022 631 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 DSG1Q02413 1049 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 ELAVL2Q12926 359 aaKnown RBP25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 RTP2Q5QGT7 225 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 SLC9A9Q8IVB4 645 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 DPP3Q9NY33 737 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 CLDND1Q9NY35 253 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 VWA8A3KMH1 1905 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 RBM10P98175 930 aaKnown RBP25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 LMBRD2Q68DH5 695 aaPredicted RBP25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 NT5DC4Q86YG4 428 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 RIN2Q8WYP3 895 aaPredicted RBP25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 HLA-CQ95604 372 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 TTPALQ9BTX7 342 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 CLSTN2Q9H4D0 955 aa25.82■■□□□ 1.72
UBE2E3-202ENST00000410062 TRAPPC3O43617 180 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 BMP6P22004 513 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 MCM4P33991 863 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 CYP24A1Q07973 514 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 COL19A1Q14993 1142 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 COBLL1Q53SF7 1204 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 C9orf57Q5W0N0 161 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 EFHBQ8N7U6 833 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 GPT2Q8TD30 523 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 TMEM174Q8WUU8 243 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 PABPC5Q96DU9 382 aaKnown RBP25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 PTPRJQ12913 1337 aa25.81■■□□□ 1.72
UBE2E3-202ENST00000410062 CLASP2O75122 1294 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CNPP09543 421 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CASP4P49662 377 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 MORC3Q14149 939 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CTC1Q2NKJ3 1217 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 ZCWPW2Q504Y3 356 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 PRSS55Q6UWB4 352 aaPredicted RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 ADSSL1Q8N142 457 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CACTINQ8WUQ7 758 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CCDC127Q96BQ5 260 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 CDCA3Q99618 268 aaPredicted RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 GTPBP4Q9BZE4 634 aaKnown RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 UBE2ZQ9H832 354 aaPredicted RBP25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 KIAA1468Q9P260 1216 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 SSX2IPQ9Y2D8 614 aa25.8■■□□□ 1.72
UBE2E3-202ENST00000410062 ANO9A1A5B4 782 aa25.79■■□□□ 1.72
UBE2E3-202ENST00000410062 PIRO00625 290 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms