RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CCDC30Q5VVM6 783 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 ARMC3Q5W041 872 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 TMEM132EQ6IEE7 984 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 ZC3H14Q6PJT7 736 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 NEK10Q6ZWH5 1172 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 BEND5Q7L4P6 421 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 HEATR4Q86WZ0 1026 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 TMEFF1Q8IYR6 380 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 C18orf8Q96DM3 657 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 SAMD11Q96NU1 681 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 PYM1Q9BRP8 204 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 CHCHD6Q9BRQ6 235 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 CNPPD1Q9BV87 410 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 EIF2AQ9BY44 585 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 BRD9Q9H8M2 597 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 SERHLQ9NQF3 203 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 CNNM1Q9NRU3 951 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 PNPOQ9NVS9 261 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 MYOTQ9UBF9 498 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 CPNE7Q9UBL6 633 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 AFF4Q9UHB7 1163 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 SYNPO2Q9UMS6 1093 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 RWDD3Q9Y3V2 267 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 PRAMEF22A3QJZ6 481 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 F5H0A9 414 aaPredicted RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 IPO5O00410 1097 aaKnown RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 TRIM38O00635 465 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 HGSO14964 777 aaPredicted RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 ARHGAP6O43182 974 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 TADA3O75528 432 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 SOAT2O75908 522 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 SLC6A11P48066 632 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 CAP1Q01518 475 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 PTK2BQ14289 1009 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 FAM110CQ1W6H9 321 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 FBLN7Q53RD9 439 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 CCDC178Q5BJE1 867 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 SLC45A4Q5BKX6 768 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 PRAMEF18Q5VWM3 479 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 TANGO2Q6ICL3 276 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 CNKSR3Q6P9H4 555 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 GALNT5Q7Z7M9 940 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 TRIM48Q8IWZ4 208 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 SDR16C5Q8N3Y7 309 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 TTC30BQ8N4P2 665 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 CDYL2Q8N8U2 506 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 GLB1L3Q8NCI6 653 aaPredicted RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 OR2I1PQ8NGU4 316 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 SPPL3Q8TCT6 385 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 IQCDQ96DY2 449 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 PAWRQ96IZ0 340 aaKnown RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 TREX2Q9BQ50 279 aaPredicted RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 TM7SF3Q9NS93 570 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 RBM12Q9NTZ6 932 aaKnown RBP5.67□□□□□ -1.5
LSM5-205ENST00000409952 IRAK4Q9NWZ3 460 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 ASH2LQ9UBL3 628 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 CPA4Q9UI42 421 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 FBXO10Q9UK96 956 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 USP18Q9UMW8 372 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 WASF3Q9UPY6 502 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 HCFC2Q9Y5Z7 792 aa5.67□□□□□ -1.5
LSM5-205ENST00000409952 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 ACOT7O00154 380 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 PLOD3O60568 738 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 ATP1A3P13637 1013 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 AOAHP28039 575 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 STAT5AP42229 794 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 PRR5P85299 388 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 FOXO4P98177 505 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 CDC42EP1Q00587 391 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 CREMQ03060 361 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 TLE2Q04725 743 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 TIGD6Q17RP2 521 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 ADCK5Q3MIX3 580 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 MOGAT3Q86VF5 341 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 RHOT1Q8IXI2 618 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 SH2D3CQ8N5H7 860 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 LSMEM1Q8N8F7 131 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 CYP2W1Q8TAV3 490 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 FAM71BQ8TC56 605 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 GAB3Q8WWW8 586 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 CLPTM1LQ96KA5 538 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 NELL2Q99435 816 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 AP1M1Q9BXS5 423 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 SENP6Q9GZR1 1112 aaPredicted RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 MTG2Q9H4K7 406 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 SARS2Q9NP81 518 aaKnown RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 GJB4Q9NTQ9 266 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 ANKEF1Q9NU02 776 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 TDP1Q9NUW8 608 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 PIH1D1Q9NWS0 290 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms