RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC45A1Q9Y2W3 748 aa21.54■■□□□ 1.04
USP39-204ENST00000409766 UMODL1Q5DID0 1318 aa21.54■■□□□ 1.04
USP39-204ENST00000409766 ACKR2O00590 384 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 CETPP11597 493 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 ADORA2AP29274 412 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 ECHS1P30084 290 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 PTENP60484 403 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 TFDP1Q14186 410 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 ALS2CLQ60I27 953 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 MREGQ8N565 214 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 WHAMMQ8TF30 809 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 ZBTB10Q96DT7 871 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 ZNF408Q9H9D4 720 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 PCDHB4Q9Y5E5 795 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 CST3P01034 146 aaPredicted RBP21.53■■□□□ 1.04
USP39-204ENST00000409766 CENPCQ03188 943 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 LAMC2Q13753 1193 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 GJC2Q5T442 439 aaPredicted RBP21.53■■□□□ 1.04
USP39-204ENST00000409766 NAA35Q5VZE5 725 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 AADACL2Q6P093 401 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 TMEM270Q6UE05 265 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 MAMDC4Q6UXC1 1216 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 CPA5Q8WXQ8 436 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 NLRP4Q96MN2 994 aa21.53■■□□□ 1.04
USP39-204ENST00000409766 AVENQ9NQS1 362 aaPredicted RBP21.53■■□□□ 1.04
USP39-204ENST00000409766 BTBD19C9JJ37 291 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 C22orf31O95567 290 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 ASS1P00966 412 aaKnown RBP21.52■■□□□ 1.04
USP39-204ENST00000409766 POTEJP0CG39 1038 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 CTNNA1P35221 906 aaKnown RBP21.52■■□□□ 1.04
USP39-204ENST00000409766 CLCN3P51790 818 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 PPP2R5EQ16537 467 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 MPZL3Q6UWV2 235 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 CPNE8Q86YQ8 564 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 SEC14L1Q92503 715 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 CYFIP2Q96F07 1278 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 VTA1Q9NP79 307 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 PSD3Q9NYI0 1048 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 PCDHA3Q9Y5H8 950 aa21.52■■□□□ 1.04
USP39-204ENST00000409766 CCDC66A2RUB6 948 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ASAP2O43150 1006 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 TTI1O43156 1089 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 MYBL1P10243 752 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 CTNNA2P26232 953 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 GUCY2FP51841 1108 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 MAP1SQ66K74 1059 aaPredicted RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 TRIM11Q96F44 468 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ZNF668Q96K58 619 aaPredicted RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 IMPG2Q9BZV3 1241 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 MTMR12Q9C0I1 747 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ERVK-5Q9HDB9 667 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 CLEC11AQ9Y240 323 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 GOLGA6L10A0A0M3HER8 536 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 RBM47A0AV96 593 aaKnown RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 INO80B-WBP1J3KQ70 363 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 SPOPO43791 374 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 LGALS2P05162 132 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 GNA15P30679 374 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 GTF2A2P52657 109 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 MBTD1Q05BQ5 628 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 SURF1Q15526 300 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ZNF484Q5JVG2 852 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ATF7IP2Q5U623 682 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ADAT2Q7Z6V5 191 aaKnown RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 ABRAQ8N0Z2 381 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 UBR7Q8N806 425 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 RBBP8NLQ8NC74 664 aaPredicted RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 SH3GL2Q99962 352 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 CELF4Q9BZC1 486 aaKnown RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
USP39-204ENST00000409766 MINDY3Q9H8M7 445 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 ANK1P16157 1881 aa21.51■■□□□ 1.03
USP39-204ENST00000409766 CCL15-CCL14A0A0B4J2E2 113 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 B4GALT5O43286 388 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 STRNO43815 780 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 CFHP08603 1231 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 RRM1P23921 792 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 NSFP46459 744 aaKnown RBP21.5■■□□□ 1.03
USP39-204ENST00000409766 CCL15Q16663 113 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 DUOXA2Q1HG44 320 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 TRIM72Q6ZMU5 477 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 MON1BQ7L1V2 547 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 DDX42Q86XP3 938 aaKnown RBP eCLIP21.5■■□□□ 1.03
USP39-204ENST00000409766 IQCKQ8N0W5 287 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 BRI3BPQ8WY22 251 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 NFKBIZQ9BYH8 718 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 KATNBL1Q9H079 304 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 FAM204AQ9H8W3 233 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 MORF4L1Q9UBU8 362 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 MGAMO43451 1857 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 MROH7Q68CQ1 1323 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 HSF2BPO75031 334 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 GH1P01241 217 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 HOXC6P09630 235 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 IQCF3P0C7M6 154 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 PYGMP11217 842 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 INSRRP14616 1297 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 HSPA6P17066 643 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 ZNF132P52740 706 aa21.5■■□□□ 1.03
USP39-204ENST00000409766 HLTFQ14527 1009 aaKnown RBP eCLIP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms