RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 XPOTO43592 962 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 PRKCSHP14314 528 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 AP3M2P53677 418 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 MCCD1P59942 119 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 TCERG1LQ5VWI1 586 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 ALKAL1Q6UXT8 129 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 TRIM59Q8IWR1 403 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 MICALL1Q8N3F8 863 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 HELQQ8TDG4 1101 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 CACTINQ8WUQ7 758 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 LPPQ93052 612 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 CCDC127Q96BQ5 260 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 RBSNQ9H1K0 784 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 HSD3B7Q9H2F3 369 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 CWH43Q9H720 699 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 PDE11AQ9HCR9 933 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 PLAGL2Q9UPG8 496 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 PCDHB12Q9Y5F1 795 aa17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
TSPAN4-208ENST00000409531 ARL5CA6NH57 179 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 TULP1O00294 542 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 OFD1O75665 1012 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 DLATP10515 647 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 KCNE1P15382 129 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 TNNI1P19237 187 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 MAN2A1Q16706 1144 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 XKR4Q5GH76 650 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 DCAF17Q5H9S7 520 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 KLHL23Q8NBE8 558 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 URGCPQ8TCY9 931 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 CGRRF1Q99675 332 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 TUBGCP2Q9BSJ2 902 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 LMAN2LQ9H0V9 348 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 KLK14Q9P0G3 267 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 KANSL3Q9P2N6 904 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 LIMA1Q9UHB6 759 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 C2CD2Q9Y426 696 aa17.87■□□□□ 0.45
TSPAN4-208ENST00000409531 MEIS3P2A8K0S8 358 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 GRM6O15303 877 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 INPPL1O15357 1258 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 LAG3P18627 525 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 GTF2H1P32780 548 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 MLH1P40692 756 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 CLDN10P78369 228 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 TMEM132DQ14C87 1099 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 UVSSAQ2YD98 709 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 SPPL3Q8TCT6 385 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 ANKRD36BP1Q96IX9 119 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 GAD1Q99259 594 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 ALG13Q9NP73 1137 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 PRDM6Q9NQX0 595 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 SLC38A7Q9NVC3 462 aa17.86■□□□□ 0.45
TSPAN4-208ENST00000409531 SMIM28A0A1B0GU29 152 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 LRRC10BA6NIK2 292 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 LRRIQ3A6PVS8 624 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 N4BP1O75113 896 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 TNNC2P02585 160 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 ITGB1P05556 798 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 THP07101 528 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 TMEM191BP0C7N4 346 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 ATP1A3P13637 1013 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 GRIK3Q13003 919 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 KRT31Q15323 416 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 FILIP1LQ4L180 1135 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 JADE1Q6IE81 842 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 COLGALT1Q8NBJ5 622 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 SLC35C1Q96A29 364 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 INTS13Q9NVM9 706 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 HCSTQ9UBK5 93 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 UBQLN1Q9UMX0 589 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 EYSQ5T1H1 3165 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 VCANP13611 3396 aa17.85■□□□□ 0.45
TSPAN4-208ENST00000409531 MEFVO15553 781 aaPredicted RBP17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 SERPINC1P01008 464 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 TRIM49P0CI25 452 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 TRIM49CP0CI26 452 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 TFAMQ00059 246 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 KCNH2Q12809 1159 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 KCNT2Q6UVM3 1135 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 BEST2Q8NFU1 509 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 PLEKHO2Q8TD55 490 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 ZNF558Q96NG5 402 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 INPP5FQ9Y2H2 1132 aa17.84■□□□□ 0.45
TSPAN4-208ENST00000409531 PRUNE2Q8WUY3 3088 aa17.83■□□□□ 0.45
TSPAN4-208ENST00000409531 GOLGA6L3A6NEY3 463 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 FGF18O76093 207 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 NFICP08651 508 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 CYP3A5P20815 502 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 ALDH7A1P49419 539 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 SCNN1GP51170 649 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms