RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 KRT86O43790 486 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 MYL6P60660 151 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 KIF5AQ12840 1032 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CUL2Q13617 745 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 BMS1Q14692 1282 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 ZNF569Q5MCW4 686 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 VPS36Q86VN1 386 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 FAM81BQ96LP2 452 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 PACSIN1Q9BY11 444 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SENP6Q9GZR1 1112 aaPredicted RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 NXF3Q9H4D5 531 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 TRMT13Q9NUP7 481 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SNTG2Q9NY99 539 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 NAGPAQ9UK23 515 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 DUSP10Q9Y6W6 482 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 PDCD11Q14690 1871 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 PJA2O43164 708 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CLSTN1O94985 981 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SGPL1O95470 568 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CHRNA1P02708 482 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 UBXN11Q5T124 520 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 RPAINQ86UA6 219 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SLC47A2Q86VL8 602 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 DNAAF5Q86Y56 855 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 GLYCTKQ8IVS8 523 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SLC35F6Q8N357 371 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 C1orf127Q8N9H9 656 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SNX27Q96L92 541 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 TSEN34Q9BSV6 310 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CCDC94Q9BW85 323 aaPredicted RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 IMPG2Q9BZV3 1241 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 CXCL16Q9H2A7 254 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 SIX4Q9UIU6 781 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 NOCTQ9UK39 431 aaKnown RBP15.12■□□□□ 0.01
GPNMB-203ENST00000409458 HES2Q9Y543 173 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 PAXBP1Q9Y5B6 917 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 TRIP11Q15643 1979 aa15.12■□□□□ 0.01
GPNMB-203ENST00000409458 A0A1W2PQ45 241 aaPredicted RBP15.11■□□□□ 0.01
GPNMB-203ENST00000409458 A0A1W2PQY0 241 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 KRT5P13647 590 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 ACO1P21399 889 aaKnown RBP15.11■□□□□ 0.01
GPNMB-203ENST00000409458 CASQ1P31415 396 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 TRPC3Q13507 836 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 TMEM132DQ14C87 1099 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
GPNMB-203ENST00000409458 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 AGPAT1Q99943 283 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 TRIM6Q9C030 488 aaPredicted RBP15.11■□□□□ 0.01
GPNMB-203ENST00000409458 MYO1AQ9UBC5 1043 aa15.11■□□□□ 0.01
GPNMB-203ENST00000409458 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 THPOP40225 353 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 PTPN11Q06124 597 aaPredicted RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 NAB2Q15742 525 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 ZNF699Q32M78 642 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 ALKBH5Q6P6C2 394 aaKnown RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 RPUSD2Q8IZ73 545 aaKnown RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 CXorf38Q8TB03 319 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 KIF12Q96FN5 646 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 XYLT2Q9H1B5 865 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 UNC93B1Q9H1C4 597 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 LUC7LQ9NQ29 371 aaKnown RBP15.1■□□□□ 0.01
GPNMB-203ENST00000409458 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 C2CD2Q9Y426 696 aa15.1■□□□□ 0.01
GPNMB-203ENST00000409458 RECQL4O94761 1208 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 CALCAP01258 141 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 ITGB3P05106 788 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 RPLP2P05387 115 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 KRT19P08727 400 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 CYP11B1P15538 503 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 CHRNB2P17787 502 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 TNFAIP3P21580 790 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 PTK7Q13308 1070 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 SGSM1Q2NKQ1 1148 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 TRIM71Q2Q1W2 868 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 C10orf76Q5T2E6 689 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 CD302Q8IX05 232 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 UBR7Q8N806 425 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 SECISBP2LQ93073 1101 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 SEPT11Q9NVA2 429 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 RIOK3O14730 519 aaKnown RBP15.09■□□□□ 0.01
GPNMB-203ENST00000409458 RPS6KA5O75582 802 aa15.09■□□□□ 0.01
GPNMB-203ENST00000409458 AKAP5P24588 427 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms