RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ZNF830Q96NB3 372 aaPredicted RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 SIX4Q9UIU6 781 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 LUC7L2Q9Y383 392 aaKnown RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 SMIM28A0A1B0GU29 152 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 KRT9P35527 623 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 NCOA4Q13772 614 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 IQCEQ6IPM2 695 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 CACNA2D4Q7Z3S7 1137 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 CNGA4Q8IV77 575 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 CCDC150Q8NCX0 1101 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 BAP1Q92560 729 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
SSB-202ENST00000409333 IQCDQ96DY2 449 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 GAD1Q99259 594 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 DERAQ9Y315 318 aa18.15■□□□□ 0.5
SSB-202ENST00000409333 PTGESO14684 152 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 ITGB3P05106 788 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 KRT19P08727 400 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 AFF1P51825 1210 aaKnown RBP18.14■□□□□ 0.5
SSB-202ENST00000409333 ZBTB6Q15916 424 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 SPOPLQ6IQ16 392 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 LRRC8AQ8IWT6 810 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 GSTCDQ8NEC7 633 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 TATDN2Q93075 761 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 NAA15Q9BXJ9 866 aaKnown RBP18.14■□□□□ 0.5
SSB-202ENST00000409333 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 DPP3Q9NY33 737 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 PLAGL2Q9UPG8 496 aa18.14■□□□□ 0.5
SSB-202ENST00000409333 ARL5CA6NH57 179 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 ENPP3O14638 875 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 SKIP12755 728 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 KCNE1P15382 129 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 RAG1P15918 1043 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 MYL6P60660 151 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 ZBED6P86452 979 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 COL13A1Q5TAT6 717 aaPredicted RBP18.14■□□□□ 0.49
SSB-202ENST00000409333 RRAGAQ7L523 313 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 NT5C1BQ96P26 610 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 FBXL5Q9UKA1 691 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 DNAJC12Q9UKB3 198 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 GIT1Q9Y2X7 761 aa18.14■□□□□ 0.49
SSB-202ENST00000409333 LRRC53A6NM62 1247 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 POLR2BP30876 1174 aaKnown RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 NOP14P78316 857 aaKnown RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 FAM189BP81408 668 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 TRPC3Q13507 836 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 RAPGEF1Q13905 1077 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 E4F1Q66K89 784 aaPredicted RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 GPIHBP1Q8IV16 184 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 PPM1KQ8N3J5 372 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 PGBD4Q96DM1 585 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 RPS6KC1Q96S38 1066 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 DNAJC7Q99615 494 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 EDEM3Q9BZQ6 932 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 APOBEC3GQ9HC16 384 aaKnown RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 UBE2TQ9NPD8 197 aaPredicted RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
SSB-202ENST00000409333 UBQLN1Q9UMX0 589 aaKnown RBP18.13■□□□□ 0.49
SSB-202ENST00000409333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 ZC3H11AO75152 810 aaKnown RBP eCLIP18.12■□□□□ 0.49
SSB-202ENST00000409333 CLSTN1O94985 981 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 ASS1P00966 412 aaKnown RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 CSF2RAP15509 400 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 RFC2P35250 354 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 SCNN1GP51170 649 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 PDXDC1Q6P996 788 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 KAT5Q92993 513 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 PPP1R10Q96QC0 940 aaKnown RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 XYLT2Q9H1B5 865 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 GOLGA2P5Q9HBQ8 144 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 ITGA11Q9UKX5 1188 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 EOMESO95936 686 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 PNMA6AP0CW24 399 aaPredicted RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 JAM2P57087 298 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 ARHGAP44Q17R89 818 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 WDR44Q5JSH3 913 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 MFSD5Q6N075 450 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 CNKSR3Q6P9H4 555 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 BEST2Q8NFU1 509 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 OR8K1Q8NGG5 319 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
SSB-202ENST00000409333 KREMEN1Q96MU8 473 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 PANX2Q96RD6 677 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 TSPAN18Q96SJ8 248 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 IMPG2Q9BZV3 1241 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 GPR88Q9GZN0 384 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 AGAP1Q9UPQ3 857 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 NUB1Q9Y5A7 615 aa18.12■□□□□ 0.49
SSB-202ENST00000409333 PPEF2O14830 753 aa18.11■□□□□ 0.49
SSB-202ENST00000409333 RFX1P22670 979 aa18.11■□□□□ 0.49
SSB-202ENST00000409333 CCZ1BP86790 482 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms