RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 TUBGCP4Q9UGJ1 667 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 UBQLN1Q9UMX0 589 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 EIF3DO15371 548 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 XPOTO43592 962 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 GARTP22102 1010 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 CLCN4P51793 760 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 EHHADHQ08426 723 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 SMAD2Q15796 467 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 ZBTB6Q15916 424 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 C3orf58Q8NDZ4 430 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 ZNF507Q8TCN5 953 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 APOL5Q9BWW9 433 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 GOLPH3LQ9H4A5 285 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 FNIP2Q9P278 1114 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 NUB1Q9Y5A7 615 aa19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-206ENST00000409141 NCOR1O75376 2440 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 TULP1O00294 542 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 LDHAP00338 332 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 CYP3A5P20815 502 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 BRCC3P46736 316 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 CREMQ03060 361 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 JADE1Q6IE81 842 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 SYCE2Q6PIF2 218 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 PRSS55Q6UWB4 352 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 CRELD2Q6UXH1 353 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 EPM2AIP1Q7L775 607 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 GLYCTKQ8IVS8 523 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 SAAL1Q96ER3 474 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 FAM213AQ9BRX8 229 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 S1PR5Q9H228 398 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 PCIF1Q9H4Z3 704 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 ASB7Q9H672 318 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 SLC39A2Q9NP94 309 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 DZANK1Q9NVP4 752 aa19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 CIZ1Q9ULV3 898 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 USP15Q9Y4E8 981 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-206ENST00000409141 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 I3L4J1 428 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 ZNF202O95125 648 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 MYL1P05976 194 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 FGFR3P22607 806 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 POU5F1Q01860 360 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 ARMCX5Q6P1M9 558 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 PDXDC1Q6P996 788 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 PALB2Q86YC2 1186 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 LNX1Q8TBB1 728 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 NOC3LQ8WTT2 800 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 PIK3R5Q8WYR1 880 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 FBXL18Q96ME1 805 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 CBWD1Q9BRT8 395 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 EXOC1Q9NV70 894 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 GOLGA8IPA6NC78 632 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 GOLGA8JA6NMD2 632 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 KLRC4O43908 158 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 LRPAP1P30533 357 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 HOXD13P35453 343 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 TMEM132DQ14C87 1099 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 PSMD5Q16401 504 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 KRBA2Q6ZNG9 492 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 NELFCDQ8IXH7 590 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 TMEM130Q8N3G9 435 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 C12orf76Q8N812 135 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 BEST2Q8NFU1 509 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 SCFD1Q8WVM8 642 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 DERAQ9Y315 318 aa19.48■□□□□ 0.71
PDLIM2-206ENST00000409141 TNFRSF10AO00220 468 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 EXTL3O43909 919 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 IL18RAPO95256 599 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 GLUD1P00367 558 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 NFICP08651 508 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 TKTP29401 623 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 MCM4P33991 863 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 GUCY2FP51841 1108 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 PSMD2Q13200 908 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 KMT5BQ4FZB7 885 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 RARS2Q5T160 578 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 SPATA1Q5VX52 437 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 CES5AQ6NT32 575 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 CLSTN3Q9BQT9 956 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 PRKAG3Q9UGI9 489 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 VCANP13611 3396 aa19.47■□□□□ 0.71
PDLIM2-206ENST00000409141 UBE4BO95155 1302 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 KIAA0391O15091 583 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 RPN1P04843 607 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 SPATA31D3P0C874 917 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 ITIH3Q06033 890 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 ELMSAN1Q6PJG2 1045 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 SPATA31D4Q6ZUB0 917 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 GPD1LQ8N335 351 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 CCDC34Q96HJ3 373 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 ADAM7Q9H2U9 754 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 DPP7Q9UHL4 492 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 C2CD2Q9Y426 696 aa19.46■□□□□ 0.71
PDLIM2-206ENST00000409141 BDP1A6H8Y1 2624 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms