RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 FAM118BQ9BPY3 351 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 CD248Q9HCU0 757 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 HAUS2Q9NVX0 235 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
MSH2-202ENST00000406134 SPOPO43791 374 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 DPEP1P16444 411 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 GARTP22102 1010 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
MSH2-202ENST00000406134 NOMO3P69849 1222 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 CETN1Q12798 172 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ODF2Q5BJF6 829 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 CCDC105Q8IYK2 499 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ZNRF3Q9ULT6 936 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 CENPFP49454 3210 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 MCM3APO60318 1980 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ECEL1O95672 775 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 SCP2P22307 547 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ZNF132P52740 706 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ITGA8P53708 1063 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ZNF280AP59817 542 aaPredicted RBP10.51□□□□□ -0.73
MSH2-202ENST00000406134 PSMD6Q15008 389 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 MICALCLQ6ZW33 695 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 RTKN2Q8IZC4 609 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 TTLL6Q8N841 843 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ZBTB45Q96K62 511 aaPredicted RBP10.51□□□□□ -0.73
MSH2-202ENST00000406134 PCDHA10Q9Y5I2 948 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSH2-202ENST00000406134 DNAJC8O75937 253 aaPredicted RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 GHRP10912 638 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 MGAT5Q09328 741 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 RNF187Q5TA31 235 aaPredicted RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 RDM1Q8NG50 284 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 ASAP3Q8TDY4 903 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 CABS1Q96KC9 395 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 NINJ2Q9NZG7 142 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 PASKQ96RG2 1323 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 RGS16O15492 202 aaPredicted RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 TCEA3O75764 348 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 GBP1P32455 592 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 PRKCEQ02156 737 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 MAMLD1Q13495 774 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 SLMAPQ14BN4 828 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 GALNTL6Q49A17 601 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 CACNA2D3Q8IZS8 1091 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 KIFAP3Q92845 792 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 C17orf75Q9HAS0 396 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 CYP26B1Q9NR63 512 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 KLC4Q9NSK0 619 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 ABCF3Q9NUQ8 709 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 TLDC2A0PJX2 215 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 KIAA0754O94854 1291 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 ACSL3O95573 720 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 PIGRP01833 764 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 NR3C2P08235 984 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 SGO2Q562F6 1265 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 PLEKHA7Q6IQ23 1121 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 RELL1Q8IUW5 271 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
MSH2-202ENST00000406134 PRKAG3Q9UGI9 489 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 PARP2Q9UGN5 583 aa10.5□□□□□ -0.73
MSH2-202ENST00000406134 ZNF638Q14966 1978 aaKnown RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 PLXNA1Q9UIW2 1896 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 CCT8L1PA6NM43 557 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 RASGRF2O14827 1237 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 EXTL3O43909 919 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SORBS3O60504 671 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 PROSCO94903 275 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 HLA-DRAP01903 254 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 RALAP11233 206 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 MAPK4P31152 587 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 OGDHQ02218 1023 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 ITIH4Q14624 930 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 TNIP1Q15025 636 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 TRIP13Q15645 432 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 GKAP1Q5VSY0 366 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 ARHGEF16Q5VV41 709 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 TXNRD3NBQ6F5E7 133 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SWSAP1Q6NVH7 229 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 CYB5D1Q6P9G0 228 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SEPT14Q6ZU15 432 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SELENOSQ9BQE4 189 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 ACTR5Q9H9F9 607 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 A1CFQ9NQ94 594 aaKnown RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 RNF146Q9NTX7 359 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms