RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TBX20Q9UMR3 447 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 BACE2Q9Y5Z0 518 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 CCL16O15467 120 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 FAM189A1O60320 539 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 PIGRP01833 764 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 KRT18P05783 430 aaKnown RBP16.77■□□□□ 0.28
TPM1-207ENST00000403994 POU2F2P09086 479 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 SCP2P22307 547 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
TPM1-207ENST00000403994 RPL9P32969 192 aaKnown RBP16.77■□□□□ 0.28
TPM1-207ENST00000403994 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.28
TPM1-207ENST00000403994 LIG4P49917 911 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 PPM1LQ5SGD2 360 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 EPSTI1Q96J88 318 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
TPM1-207ENST00000403994 TTC26A0AVF1 554 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 K7ELQ4 463 aaPredicted RBP16.76■□□□□ 0.27
TPM1-207ENST00000403994 SYN3O14994 580 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 CLTAP09496 248 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 AVPR2P30518 371 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 TNFSF9P41273 254 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 PTPN5P54829 565 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 NTHL1P78549 312 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 TCF15Q12870 199 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
TPM1-207ENST00000403994 ZBTB41Q5SVQ8 909 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
TPM1-207ENST00000403994 SLC39A4Q6P5W5 647 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 GRASPQ7Z6J2 395 aaPredicted RBP16.76■□□□□ 0.27
TPM1-207ENST00000403994 MAP4K3Q8IVH8 894 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 TMEM130Q8N3G9 435 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 PRRX2Q99811 253 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM1-207ENST00000403994 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 MTMR6Q9Y217 621 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 CFAP54Q96N23 3096 aa16.76■□□□□ 0.27
TPM1-207ENST00000403994 NARSO43776 548 aaKnown RBP16.75■□□□□ 0.27
TPM1-207ENST00000403994 TRAK2O60296 914 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 XYLBO75191 536 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 FSHRP23945 695 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
TPM1-207ENST00000403994 MCM4P33991 863 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 ROR1Q01973 937 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 HTR4Q13639 388 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
TPM1-207ENST00000403994 SLC8B1Q6J4K2 584 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 TMEM105Q8N8V8 129 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 KIF12Q96FN5 646 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 SUSD3Q96L08 255 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 CLIC6Q96NY7 704 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 ZHX3Q9H4I2 956 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 PLEKHA5Q9HAU0 1116 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
TPM1-207ENST00000403994 FRYLO94915 3013 aa16.75■□□□□ 0.27
TPM1-207ENST00000403994 A0A0B4J269 797 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 WDR27A2RRH5 827 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 OGTO15294 1046 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 LAMP2P13473 410 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 GTF2BQ00403 316 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
TPM1-207ENST00000403994 SPAG1Q07617 926 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
TPM1-207ENST00000403994 KYAT1Q16773 422 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 MSTO1Q9BUK6 570 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 MFSD1Q9H3U5 465 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 HCFC1R1Q9NWW0 138 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 POLIQ9UNA4 740 aa16.74■□□□□ 0.27
TPM1-207ENST00000403994 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
TPM1-207ENST00000403994 ZFHX2Q9C0A1 2572 aaPredicted RBP16.74■□□□□ 0.27
TPM1-207ENST00000403994 ANHXE9PGG2 379 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 LRPAP1P30533 357 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 ABCD1P33897 745 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 DDIT3P35638 169 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 TXLNAP40222 546 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 MRPL58Q14197 206 aaKnown RBP16.73■□□□□ 0.27
TPM1-207ENST00000403994 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
TPM1-207ENST00000403994 ZNF280DQ6N043 979 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 RTL10Q7L3V2 364 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 SIX5Q8N196 739 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 NXPE3Q969Y0 559 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 USP28Q96RU2 1077 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 CCDC39Q9UFE4 941 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 FBXL21Q9UKT6 434 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 UBQLN1Q9UMX0 589 aaKnown RBP16.73■□□□□ 0.27
TPM1-207ENST00000403994 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
TPM1-207ENST00000403994 NUMBLQ9Y6R0 609 aa16.73■□□□□ 0.27
TPM1-207ENST00000403994 LACTBL1A8MY62 500 aa16.72■□□□□ 0.27
TPM1-207ENST00000403994 TISP43B9A030 160 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms