RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CHST15Q7LFX5 561 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 DAAM2Q86T65 1068 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 CELF5Q8N6W0 485 aaKnown RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM156AQ8NDB6 213 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 CDK5RAP3Q96JB5 506 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 BDH2Q9BUT1 245 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 C11orf54Q9H0W9 315 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 RTEL1Q9NZ71 1219 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZCCHC11Q5TAX3 1644 aaKnown RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 SUPT6HQ7KZ85 1726 aaKnown RBP6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 ATP10BO94823 1461 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 LRRC9Q6ZRR7 1453 aa6.27□□□□□ -1.41
HMGB3P19-201ENST00000403971 EHBP1L1Q8N3D4 1523 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 B5MCH6 92 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 KIAA0391O15091 583 aaKnown RBP6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 CAND2O75155 1236 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 ITGB3P05106 788 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 TYRP14679 529 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 GNAT2P19087 354 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 HK1P19367 917 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLC6A4P31645 630 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 AGFG1P52594 562 aaKnown RBP6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 CLRN1P58418 232 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 RAB1AP62820 205 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 BMT2Q1RMZ1 405 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAP9Q49MG5 647 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 MFSD5Q6N075 450 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 CCDC149Q6ZUS6 474 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 SEM1Q6ZVN7 128 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 DOK3Q7L591 496 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM83AQ86UY5 434 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 KIAA0319LQ8IZA0 1049 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZNF808Q8N4W9 903 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 Q8TCH9 128 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 ST8SIA2Q92186 375 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLC35A4Q96G79 324 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM204AQ9H8W3 233 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 ARNT2Q9HBZ2 717 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 SPON1Q9HCB6 807 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 FBXO34Q9NWN3 711 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 HDAC5Q9UQL6 1122 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM50BQ9Y247 325 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 PCDHA1Q9Y5I3 950 aa6.26□□□□□ -1.41
HMGB3P19-201ENST00000403971 CDK13Q14004 1512 aaKnown RBP6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM227AF5H4B4 570 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 PJA2O43164 708 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 TEX33O43247 280 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 KRT18P05783 430 aaKnown RBP6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 RHCEP18577 417 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 PRDX5P30044 214 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 IL12RB1P42701 662 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 RHDQ02161 417 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 CREMQ03060 361 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 Q6ZSN1 163 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 GPRIN1Q7Z2K8 1008 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 POLNQ7Z5Q5 900 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 APBB1IPQ7Z5R6 666 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 SGMS1Q86VZ5 419 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 PPP1R3BQ86XI6 285 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 MDGA1Q8NFP4 955 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 TFAP2CQ92754 450 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 WWC2-AS2Q96NR7 200 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 MPHOSPH9Q99550 1183 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 NDC1Q9BTX1 674 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAN1C1Q9NR34 630 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 PNPOQ9NVS9 261 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLC52A1Q9NWF4 448 aa6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 FEZ2Q9UHY8 353 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P19-201ENST00000403971 MTUS2Q5JR59 1369 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 A0A088AWK7 358 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 CCDC194A0A1B0GVG4 234 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 CAPN14A8MX76 684 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 PRR5-ARHGAP8B1AHC4 643 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZNF623O75123 536 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZBED1O96006 694 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 AHSGP02765 367 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 COMTP21964 271 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLC6A2P23975 617 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 PHKA1P46020 1223 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 NFIXQ14938 502 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 CNN3Q15417 329 aaKnown RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 KIAA0753Q2KHM9 967 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 PABPC1LQ4VXU2 614 aaKnown RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 DACT2Q5SW24 774 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ATXN7L2Q5T6C5 722 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 C1QL3Q5VWW1 255 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM90A1Q86YD7 464 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms