RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 CDC42BPAQ5VT25 1732 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 KLRG2A4D1S0 409 aaPredicted RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 RECQL4O94761 1208 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 RBP3P10745 1247 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 C6P13671 934 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 IL2RBP14784 551 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 GSPT1P15170 499 aaKnown RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 MGAT1P26572 445 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 PPP3CAQ08209 521 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 FOXE3Q13461 319 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 VPS72Q15906 364 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 PTPN21Q16825 1174 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 NBPF8Q3BBV2 869 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 NAIF1Q69YI7 327 aaPredicted RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 USP51Q70EK9 711 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 HTR3DQ70Z44 454 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 XYLT1Q86Y38 959 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 UNC5CLQ8IV45 518 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 PPM1NQ8N819 430 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 OR52N2Q8NGI0 321 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 TFAP2CQ92754 450 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 GPATCH3Q96I76 525 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 FAXDC2Q96IV6 333 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 C7orf25Q9BPX7 421 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 LSM14BQ9BX40 385 aaKnown RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 CPEB1Q9BZB8 566 aaKnown RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 MANSC1Q9H8J5 431 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 TMEM140Q9NV12 185 aa4.66□□□□□ -1.66
RPA3-203ENST00000401447 CFDP1Q9UEE9 299 aaPredicted RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 EIF2B4Q9UI10 523 aaKnown RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 CHD2O14647 1828 aaKnown RBP4.66□□□□□ -1.66
RPA3-203ENST00000401447 PARD3Q8TEW0 1356 aa4.65□□□□□ -1.66
RPA3-203ENST00000401447 CAMTA1Q9Y6Y1 1673 aa4.65□□□□□ -1.66
RPA3-203ENST00000401447 TEX33O43247 280 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 NDUFS2O75306 463 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 AMHP03971 560 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 SNRPA1P09661 255 aaKnown RBP4.65□□□□□ -1.67
RPA3-203ENST00000401447 C1SP09871 688 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 RAP2AP10114 183 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 CCND1P24385 295 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 SREBF1P36956 1147 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 SP140Q13342 867 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 TUBA3CQ13748 450 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 MIIPQ5JXC2 388 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 C1QL3Q5VWW1 255 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 EFCAB12Q6NXP0 572 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 TUBA3EQ6PEY2 450 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 CRIP3Q6Q6R5 217 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 Q6ZVL8 140 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 ZNF572Q7Z3I7 529 aaPredicted RBP4.65□□□□□ -1.67
RPA3-203ENST00000401447 REPS2Q8NFH8 660 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 ZFP28Q8NHY6 868 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 JADE3Q92613 823 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 HOXB13Q92826 284 aaPredicted RBP4.65□□□□□ -1.67
RPA3-203ENST00000401447 CEP95Q96GE4 821 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 FUBP3Q96I24 572 aaKnown RBP eCLIP4.65□□□□□ -1.67
RPA3-203ENST00000401447 ZNF747Q9BV97 191 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 ASPSCR1Q9BZE9 553 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 ZNF703Q9H7S9 590 aaPredicted RBP4.65□□□□□ -1.67
RPA3-203ENST00000401447 BRWD3Q6RI45 1802 aa4.65□□□□□ -1.67
RPA3-203ENST00000401447 MST1RQ04912 1400 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 TRIM24O15164 1050 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 PJA2O43164 708 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 GPR32O75388 356 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 ZNF202O95125 648 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 IGBP1P78318 339 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 ZXDAP98168 799 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 TOB2Q14106 344 aaPredicted RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 EZH2Q15910 746 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 LSM12Q3MHD2 195 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 RABL3Q5HYI8 236 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 FAM47AQ5JRC9 791 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 RRP12Q5JTH9 1297 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 MFSD14BQ5SR56 506 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 FBXO18Q8NFZ0 1043 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 OR10H5Q8NGA6 315 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.64□□□□□ -1.67
RPA3-203ENST00000401447 CACTINQ8WUQ7 758 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 NRG4Q8WWG1 115 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 CASKIN2Q8WXE0 1202 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 DDX17Q92841 729 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 HDAC10Q969S8 669 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 CYFIP2Q96F07 1278 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 TEKT5Q96M29 485 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 CAMKK2Q96RR4 588 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 CEP89Q96ST8 783 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 SLC13A1Q9BZW2 595 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 CEP72Q9P209 647 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 POGKQ9P215 609 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 AJAP1Q9UKB5 411 aaPredicted RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 INTUQ9ULD6 942 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 SORCS3Q9UPU3 1222 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 REXO2Q9Y3B8 237 aaKnown RBP4.64□□□□□ -1.67
RPA3-203ENST00000401447 SPEF1Q9Y4P9 236 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 GLI3P10071 1580 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 PIK3R4Q99570 1358 aa4.64□□□□□ -1.67
RPA3-203ENST00000401447 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.63□□□□□ -1.67
RPA3-203ENST00000401447 TBKBP1A7MCY6 615 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms