RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PDXDC1Q6P996 788 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 CCDC149Q6ZUS6 474 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 TDRD5Q8NAT2 981 aaKnown RBP17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ZNF396Q96N95 335 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-203ENST00000400772 PRKD2Q9BZL6 878 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 IKZF4Q9H2S9 585 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 WDR6Q9NNW5 1121 aaKnown RBP17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ZDHHC7Q9NXF8 308 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 MTRRQ9UBK8 725 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 BACE2Q9Y5Z0 518 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 TMEM221A6NGB7 291 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 M0R296 226 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 OGTO15294 1046 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 ZMYND10O75800 440 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 ASGR2P07307 311 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-203ENST00000400772 OR1D2P34982 312 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 SIGLEC14Q08ET2 396 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 SMG7Q92540 1137 aaKnown RBP17.28■□□□□ 0.36
ATG4B-203ENST00000400772 ASIC4Q96FT7 647 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 SMOC2Q9H3U7 446 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 CPSF3Q9UKF6 684 aaKnown RBP17.28■□□□□ 0.36
ATG4B-203ENST00000400772 CDY1Q9Y6F8 540 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
ATG4B-203ENST00000400772 MYH15Q9Y2K3 1946 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 PDCD11Q14690 1871 aaKnown RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 TBC1D4O60343 1298 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 YEATS4O95619 227 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 F13A1P00488 732 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 LRPAP1P30533 357 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 ABCD1P33897 745 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 STAT6P42226 847 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 KCNA1Q09470 495 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 MRPL58Q14197 206 aaKnown RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 E2F4Q16254 413 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 KYAT1Q16773 422 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 VARS2Q5ST30 1063 aaKnown RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 SHC4Q6S5L8 630 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 ANKS3Q6ZW76 656 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 OTOP3Q7RTS5 596 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 PDILTQ8N807 584 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 MSTO1Q9BUK6 570 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
ATG4B-203ENST00000400772 TBC1D7Q9P0N9 293 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 SEL1LQ9UBV2 794 aa17.27■□□□□ 0.36
ATG4B-203ENST00000400772 CLUHO75153 1309 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 SYN3O14994 580 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
ATG4B-203ENST00000400772 GAP43P17677 238 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 CYP3A5P20815 502 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 ADSSP30520 456 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 CASP5P51878 434 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 PPP2R3AQ06190 1150 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 AXDND1Q5T1B0 1012 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-203ENST00000400772 SLC8B1Q6J4K2 584 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-203ENST00000400772 SUSD3Q96L08 255 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 FGFBP2Q9BYJ0 223 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 MRPL44Q9H9J2 332 aaKnown RBP17.26■□□□□ 0.35
ATG4B-203ENST00000400772 SORCS3Q9UPU3 1222 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 NUB1Q9Y5A7 615 aa17.26■□□□□ 0.35
ATG4B-203ENST00000400772 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 CUTAO60888 179 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 C8AP07357 584 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 ACOT2P49753 483 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 ADALQ6DHV7 355 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 SLFN12LQ6IEE8 588 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 STAMQ92783 540 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 HVCN1Q96D96 273 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 MYADMQ96S97 322 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 PIDD1Q9HB75 910 aa17.25■□□□□ 0.35
ATG4B-203ENST00000400772 UBQLN1Q9UMX0 589 aaKnown RBP17.25■□□□□ 0.35
ATG4B-203ENST00000400772 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-203ENST00000400772 ABLIM3O94929 683 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG4B-203ENST00000400772 IDEP14735 1019 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 MCM4P33991 863 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG4B-203ENST00000400772 ROR1Q01973 937 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 MTMR3Q13615 1198 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 UVSSAQ2YD98 709 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
ATG4B-203ENST00000400772 LIN9Q5TKA1 542 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 SPATA1Q5VX52 437 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 JADE1Q6IE81 842 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 CRELD2Q6UXH1 353 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms