RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 LIN9Q5TKA1 542 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ATL3Q6DD88 541 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 DCLRE1AQ6PJP8 1040 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 CEP57L1Q8IYX8 460 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 LEO1Q8WVC0 666 aaPredicted RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 PIK3R5Q8WYR1 880 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 SUSD6Q92537 303 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ACCSQ96QU6 501 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 LRRC27Q9C0I9 530 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 BLZF1Q9H2G9 400 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 ADAM7Q9H2U9 754 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 OLFML3Q9NRN5 406 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 CHST7Q9NS84 486 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 MUTYHQ9UIF7 546 aa9.16□□□□□ -0.94
USP16-202ENST00000399973 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
USP16-202ENST00000399973 A0A0B4J269 797 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 TTC26A0AVF1 554 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 LACTBL1A8MY62 500 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 TGM5O43548 720 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 XPOTO43592 962 aaKnown RBP9.15□□□□□ -0.94
USP16-202ENST00000399973 DCXO43602 365 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 RFPL2O75678 378 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PPP1R37O75864 691 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PRPF6O94906 941 aaKnown RBP9.15□□□□□ -0.94
USP16-202ENST00000399973 NFICP08651 508 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PRR29P0C7W0 189 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 FGFR3P22607 806 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 CASP1P29466 404 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 AFMP43652 599 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ARPP19P56211 112 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 AMPD3Q01432 767 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 KCNA1Q09470 495 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ALCAMQ13740 583 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 TMEM132DQ14C87 1099 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ATAT1Q5SQI0 421 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 JADE1Q6IE81 842 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 SLFN12LQ6IEE8 588 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PDXDC1Q6P996 788 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ALKAL1Q6UXT8 129 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 CCDC149Q6ZUS6 474 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ZNF720Q7Z2F6 126 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 GRAMD1CQ8IYS0 662 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 TDRD5Q8NAT2 981 aaKnown RBP9.15□□□□□ -0.94
USP16-202ENST00000399973 GLIS3Q8NEA6 775 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 SAAL1Q96ER3 474 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
USP16-202ENST00000399973 NECTIN4Q96NY8 510 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 TRIM9Q9C026 710 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ST6GALNAC4Q9H4F1 302 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 EPHX3Q9H6B9 360 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 MAGEF1Q9HAY2 307 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PIDD1Q9HB75 910 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 FNIP2Q9P278 1114 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 DPP7Q9UHL4 492 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 UBQLN1Q9UMX0 589 aaKnown RBP9.15□□□□□ -0.94
USP16-202ENST00000399973 ZDHHC9Q9Y397 364 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 NR2E1Q9Y466 385 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 PCDHB13Q9Y5F0 798 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 ATP6V1DQ9Y5K8 247 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 CDY1Q9Y6F8 540 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 SCN1AP35498 2009 aa9.15□□□□□ -0.94
USP16-202ENST00000399973 CCDC195A0A1B0GUA6 201 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 A0A1B0GVL5 298 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 FRMD3A2A2Y4 597 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 LOC730098B7Z3J9 87 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 ADAM12O43184 909 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 FAM189A1O60320 539 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 PFKFB1P16118 471 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 RPL9P32969 192 aaKnown RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 OR1D2P34982 312 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 FAM26FQ5R3K3 315 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 ARMCX5Q6P1M9 558 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 ANKS3Q6ZW76 656 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 GPR149Q86SP6 731 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 KREMEN2Q8NCW0 462 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 LNX1Q8TBB1 728 aaPredicted RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 SMG7Q92540 1137 aaKnown RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 KCNN1Q92952 543 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 FAM213AQ9BRX8 229 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 C1QTNF1Q9BXJ1 281 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 PLEKHA5Q9HAU0 1116 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 GDPD2Q9HCC8 539 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 MTRRQ9UBK8 725 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 CPSF3Q9UKF6 684 aaKnown RBP9.14□□□□□ -0.95
USP16-202ENST00000399973 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms