RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SV2CQ496J9 727 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 FAM102AQ5T9C2 384 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 KIAA1324Q6UXG2 1013 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 AK8Q96MA6 479 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 ECEL1O95672 775 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 CHRNA3P32297 505 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 GNGT1P63211 74 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 USP17L6PQ6QN14 398 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 MAGEF1Q9HAY2 307 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 FKTNO75072 461 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 CCT7Q99832 543 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 EFHD1Q9BUP0 239 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 RBAKQ9NYW8 714 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 GPN3Q9UHW5 284 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 PCDHB6Q9Y5E3 794 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 ATP9BO43861 1147 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 KRT8P05787 483 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 CTNNB1P35222 781 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 KRT78Q8N1N4 520 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 XYLBO75191 536 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 SLC7A14Q8TBB6 771 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 VPS11Q9H270 941 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 RERGLQ9H628 205 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 FGFR1OP2Q9NVK5 253 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 TBK1Q9UHD2 729 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 WDR47O94967 919 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 TCP11X2Q5H9J9 407 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 JADE3Q92613 823 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 MTBPQ96DY7 904 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 MXD3Q9BW11 206 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 PFASO15067 1338 aa11.53□□□□□ -0.56
CACNA1C-216ENST00000399638 LINC00854A0A1B0GVQ3 168 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 F5H6K3 240 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 ODC1P11926 461 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 KLRC3Q07444 240 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 ATPAF2Q8N5M1 289 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 EXD1Q8NHP7 514 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 HASPINQ8TF76 798 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 DDI1Q8WTU0 396 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 KLK14Q9P0G3 267 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 MROH7-TTC4A0A0A0MT08 1334 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 CYP27B1O15528 508 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 AKAP5P24588 427 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 PRKAA1Q13131 559 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 EFCAB12Q6NXP0 572 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 TRAF7Q6Q0C0 670 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 PYROXD1Q8WU10 500 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 EPN1Q9Y6I3 576 aaPredicted RBP11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
CACNA1C-216ENST00000399638 A0A087WWV3 80 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 CCDC195A0A1B0GUA6 201 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 CD4P01730 458 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 TRPC1P48995 793 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 ZRANB3Q5FWF4 1079 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 UXS1Q8NBZ7 420 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 RUBCNQ92622 972 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 NDUFS3O75489 264 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 TJP3O95049 919 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 PRDX5P30044 214 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 TCEA2Q15560 299 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 VPS72Q15906 364 aa11.52□□□□□ -0.57
CACNA1C-216ENST00000399638 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms