RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 MAPK13O15264 365 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 C2orf54Q08AI8 447 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 PCSK7Q16549 785 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 KIZQ2M2Z5 673 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 RIN2Q8WYP3 895 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 NDEL1Q9GZM8 345 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 A0A0D9SFI3 127 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 TLR2O60603 784 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 NPTXRO95502 500 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 PFKFB1P16118 471 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 EPHB4P54760 987 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 OLFML2BQ68BL8 750 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 FGD2Q7Z6J4 655 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■■ 45.2
CACNA1C-210ENST00000399606 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 TMEM161AQ9NX61 479 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 HMOX2P30519 316 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 HAUS4Q9H6D7 363 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 LATS2Q9NRM7 1088 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 GUCY2CP25092 1073 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ADD2P35612 726 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 NUMBP49757 651 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 CHSY1Q86X52 802 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 PNKPQ96T60 521 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 FDX1P10109 184 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 SV2CQ496J9 727 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 FAM102AQ5T9C2 384 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 KIAA1324Q6UXG2 1013 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 AK8Q96MA6 479 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 TBK1Q9UHD2 729 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 ATP8A1Q9Y2Q0 1164 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.54□□□□□ -0.56
CACNA1C-210ENST00000399606 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 CHRNA3P32297 505 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 USP17L6PQ6QN14 398 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 MAGEF1Q9HAY2 307 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 FKTNO75072 461 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 HEATR6Q6AI08 1181 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 CCT7Q99832 543 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 EPB41L5Q9HCM4 733 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 RBAKQ9NYW8 714 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 GPN3Q9UHW5 284 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 PCDHB6Q9Y5E3 794 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 ATP9BO43861 1147 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 CTNNB1P35222 781 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 CRLF3Q8IUI8 442 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 KRT78Q8N1N4 520 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 POLD4Q9HCU8 107 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 XYLBO75191 536 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 SLC7A14Q8TBB6 771 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 VPS11Q9H270 941 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 RERGLQ9H628 205 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 WDR47O94967 919 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 JADE3Q92613 823 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 MXD3Q9BW11 206 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 PFASO15067 1338 aa11.53□□□□□ -0.56
CACNA1C-210ENST00000399606 LINC00854A0A1B0GVQ3 168 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 A0A1B0GW55 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 F5H6K3 240 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms