RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CDHR5Q9HBB8 845 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 TRIP11Q15643 1979 aa16.27■□□□□ 0.19
COL25A1-201ENST00000399126 GRID2IPA4D2P6 1211 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 MYL3P08590 195 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 H2AFZP0C0S5 128 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 H2AFVQ71UI9 128 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 COG1Q8WTW3 980 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 ALS2CR12Q96Q35 445 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 PRMT7Q9NVM4 692 aaPredicted RBP16.26■□□□□ 0.19
COL25A1-201ENST00000399126 DONSONQ9NYP3 566 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 NUB1Q9Y5A7 615 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 MMEP08473 750 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 KRT5P13647 590 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 MFSD10Q14728 455 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 SRGAP1Q7Z6B7 1085 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 RNF217Q8TC41 542 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 CHORDC1Q9UHD1 332 aaPredicted RBP16.26■□□□□ 0.19
COL25A1-201ENST00000399126 JRKLQ9Y4A0 524 aa16.26■□□□□ 0.19
COL25A1-201ENST00000399126 ANO9A1A5B4 782 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 EFCAB8A8MWE9 144 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 ANXA13P27216 316 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 NCOA4Q13772 614 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 RNF10Q8N5U6 811 aaKnown RBP16.25■□□□□ 0.19
COL25A1-201ENST00000399126 UBXN4Q92575 508 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 SMARCAL1Q9NZC9 954 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 EHD2Q9NZN4 543 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
COL25A1-201ENST00000399126 PHACTR2O75167 634 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 CYP11B1P15538 503 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 FLT3LGP49771 235 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 TFAMQ00059 246 aaKnown RBP16.25■□□□□ 0.19
COL25A1-201ENST00000399126 GCNT1Q02742 428 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 C10orf76Q5T2E6 689 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 RSRC2Q7L4I2 434 aaKnown RBP16.25■□□□□ 0.19
COL25A1-201ENST00000399126 THAP2Q9H0W7 228 aa16.25■□□□□ 0.19
COL25A1-201ENST00000399126 TSPAN1O60635 241 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 NOP14P78316 857 aaKnown RBP16.24■□□□□ 0.19
COL25A1-201ENST00000399126 LACTBP83111 547 aaPredicted RBP16.24■□□□□ 0.19
COL25A1-201ENST00000399126 FMO1Q01740 532 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 WDR44Q5JSH3 913 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 WDR49Q8IV35 697 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 TXLNBQ8N3L3 684 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 SNX12Q9UMY4 172 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 TREHO43280 583 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 ZEB2O60315 1214 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 PSEN2P49810 448 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 PRKCZQ05513 592 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 POU5F1BQ06416 359 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 FSCN1Q16658 493 aaKnown RBP16.24■□□□□ 0.19
COL25A1-201ENST00000399126 FAM187BQ17R55 369 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 NOA1Q8NC60 698 aaKnown RBP16.24■□□□□ 0.19
COL25A1-201ENST00000399126 OSMRQ99650 979 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 CITO14578 2027 aa16.24■□□□□ 0.19
COL25A1-201ENST00000399126 KIF1CO43896 1103 aaKnown RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 ZC3H11AO75152 810 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 SSTR3P32745 418 aaPredicted RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 MYL6P60660 151 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 WHAMMP3Q1A5X7 153 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 DDX1Q92499 740 aaKnown RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 ADAMTS10Q9H324 1103 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 ATMINO43313 823 aaPredicted RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 PGK1P00558 417 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 NFICP08651 508 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 C6orf222P0C671 652 aaPredicted RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 CYP2C9P11712 490 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
COL25A1-201ENST00000399126 CPT1AP50416 773 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 CUL2Q13617 745 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 DNAJB3Q8WWF6 145 aa16.23■□□□□ 0.19
COL25A1-201ENST00000399126 HAS3O00219 553 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 GPR32O75388 356 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 FTLP02792 175 aaPredicted RBP16.22■□□□□ 0.19
COL25A1-201ENST00000399126 CLTAP09496 248 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 FCGRTP55899 365 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 FBXO38Q6PIJ6 1188 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 FMNL3Q8IVF7 1028 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 IGSF5Q9NSI5 407 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 COG5Q9UP83 839 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 MBLAC1A4D2B0 266 aaPredicted RBP16.22■□□□□ 0.19
COL25A1-201ENST00000399126 RRN3P2A6NIE6 340 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 BTNL10A8MVZ5 291 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 ERLIN2O94905 339 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 CFHP08603 1231 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 CYBAP13498 195 aa16.22■□□□□ 0.19
COL25A1-201ENST00000399126 AKR1A1P14550 325 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms