RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RRN3P2A6NIE6 340 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 ZC3H11AO75152 810 aaKnown RBP eCLIP15.02■□□□□ -0
PCDHGA11-201ENST00000398587 PPP1R37O75864 691 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 AGTP01019 485 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 PSMC6P62333 389 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 NME3Q13232 169 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 E2F4Q16254 413 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 GPAT2Q6NUI2 795 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 ZNF449Q6P9G9 518 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 APPL2Q8NEU8 664 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 TMC2Q8TDI7 906 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 FSD1LQ9BXM9 530 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
PCDHGA11-201ENST00000398587 ARHGAP20Q9P2F6 1191 aa15.02■□□□□ -0
PCDHGA11-201ENST00000398587 DBR1Q9UK59 544 aaKnown RBP15.02■□□□□ -0
PCDHGA11-201ENST00000398587 RARBP10826 455 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 CYP2C9P11712 490 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 TRIM68Q6AZZ1 485 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 ISCUQ9H1K1 167 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 MLXIPLQ9NP71 852 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 KLHL11Q9NVR0 708 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 TRAF3IP3Q9Y228 551 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 FNDC3AQ9Y2H6 1198 aaKnown RBP15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 PPP2R3BQ9Y5P8 575 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 CAPN6Q9Y6Q1 641 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 A0A0G2JND7 137 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 GRIN3BO60391 1043 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 CDH16O75309 829 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 WEE2P0C1S8 567 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 C6orf222P0C671 652 aaPredicted RBP15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 LCP1P13796 627 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 PAPOLAP51003 745 aaKnown RBP15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 CDR2Q01850 454 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 PAPD7Q5XG87 772 aaKnown RBP15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 ACAD10Q6JQN1 1059 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 THAP2Q9H0W7 228 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 BLOC1S4Q9NUP1 217 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 HPCAL4Q9UM19 191 aa15.02□□□□□ -0.01
PCDHGA11-201ENST00000398587 ATMINO43313 823 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 RGS7P49802 495 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 CUL2Q13617 745 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 GRIK5Q16478 980 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 EPC2Q52LR7 807 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 FEZF2Q8TBJ5 459 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 MKL1Q969V6 931 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 FAM96AQ9H5X1 160 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 DUSP10Q9Y6W6 482 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 SMIM22K7EJ46 135 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 MYO1CO00159 1063 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 PPP1R12AO14974 1030 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 HSPA4LO95757 839 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 MYCP01106 439 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 MX2P20592 715 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 AP1B1Q10567 949 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 CYP2W1Q8TAV3 490 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 RBM15Q96T37 977 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 DUSP9Q99956 384 aaKnown RBP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 ATRNO75882 1429 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 FAM86B1E9PN63 330 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 FAM86B2P0C5J1 330 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 GZMAP12544 262 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 NIPA1Q7RTP0 329 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 CFAP69A5D8W1 941 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 ATP5HO75947 161 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 DGKDQ16760 1214 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 PID1Q7Z2X4 250 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 TBC1D1Q86TI0 1168 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 ZNF507Q8TCN5 953 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 CYTH2Q99418 400 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 NUDT12Q9BQG2 462 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 MAGEB5Q9BZ81 275 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 VPS11Q9H270 941 aa15.01□□□□□ -0.01
PCDHGA11-201ENST00000398587 KPNA7A9QM74 516 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 WNT10BO00744 389 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 PPARGP37231 505 aaPredicted RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 BTBD8Q5XKL5 378 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 SCG3Q8WXD2 468 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MED15Q96RN5 788 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 EPAS1Q99814 870 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 ADARB2Q9NS39 739 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 FGFR1OP2Q9NVK5 253 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 LRRC10BA6NIK2 292 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 LUC7L3O95232 432 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 VIL1P09327 827 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 NCF2P19878 526 aaPredicted RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MAGEA9P43362 315 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 HERVK_113P62684 666 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MDM2Q00987 491 aaPredicted RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 P3H1Q32P28 736 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 OTOP1Q7RTM1 612 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 LRGUKQ96M69 825 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 GCNAQ96QF7 691 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MTMR9Q96QG7 549 aa15□□□□□ -0.01
PCDHGA11-201ENST00000398587 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
PCDHGA11-201ENST00000398587 MROH8Q9H579 483 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms