RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
TFF3-202ENST00000398431 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
TFF3-202ENST00000398431 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 RUBCNQ92622 972 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 NELL1Q92832 810 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 TCEAL4Q96EI5 215 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
TFF3-202ENST00000398431 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.29
TFF3-202ENST00000398431 SPATA6Q9NWH7 488 aaPredicted RBP13.21□□□□□ -0.29
TFF3-202ENST00000398431 GDE1Q9NZC3 331 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 ARHGAP28Q9P2N2 729 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 LIMCH1Q9UPQ0 1083 aa13.21□□□□□ -0.29
TFF3-202ENST00000398431 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 CCDC169A6NNP5 214 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 PODXLO00592 558 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 MOSPD3O75425 235 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 ATF2P15336 505 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 KCNE1P15382 129 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 CEBPBP17676 345 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 FCARP24071 287 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 CCR2P41597 374 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 KCNK18Q7Z418 384 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 TCEAL8Q8IYN2 117 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 ZBTB45Q96K62 511 aaPredicted RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 NELL2Q99435 816 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 NTPCRQ9BSD7 190 aaKnown RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 CCDC94Q9BW85 323 aaPredicted RBP13.2□□□□□ -0.3
TFF3-202ENST00000398431 HEBP1Q9NRV9 189 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 DMXL1Q9Y485 3027 aa13.2□□□□□ -0.3
TFF3-202ENST00000398431 CEP250Q9BV73 2442 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 F5P12259 2224 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 SFI1A8K8P3 1242 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 PP2D1A8MPX8 630 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 SYN3O14994 580 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 LILRB5O75023 590 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 HIP1RO75146 1068 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 CDC25AP30304 524 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 TRAPPC10P48553 1259 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
TFF3-202ENST00000398431 PTGDRQ13258 359 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 RINT1Q6NUQ1 792 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 TMEM130Q8N3G9 435 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 ZSWIM3Q96MP5 696 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 ACAP3Q96P50 834 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 MMTAG2Q9BU76 263 aaKnown RBP13.19□□□□□ -0.3
TFF3-202ENST00000398431 RUSC1Q9BVN2 902 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 PCDHB6Q9Y5E3 794 aa13.19□□□□□ -0.3
TFF3-202ENST00000398431 CITO14578 2027 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 PHLPP2Q6ZVD8 1323 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 MICAL2O94851 1124 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 LRG1P02750 347 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 MCF2P10911 925 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
TFF3-202ENST00000398431 ELF1P32519 619 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 RPL9P32969 192 aaKnown RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 ARPP19P56211 112 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
TFF3-202ENST00000398431 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 CORO1BQ9BR76 489 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 MRPL4Q9BYD3 311 aaKnown RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
TFF3-202ENST00000398431 SLC38A7Q9NVC3 462 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 CEP72Q9P209 647 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 CNTN3Q9P232 1028 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
TFF3-202ENST00000398431 FRYLO94915 3013 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 PRRG1O14668 218 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 SLC16A4O15374 487 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 TGM1P22735 817 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms