RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RHOT1Q8IXI2 618 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ATL2Q8NHH9 583 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 LRRC8CQ8TDW0 803 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 EPS8L1Q8TE68 723 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PARD3BQ8TEW8 1205 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 RSAD2Q8WXG1 361 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 FGFR1OP2Q9NVK5 253 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 FSCN2O14926 492 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SUN1O94901 812 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MAGEA4P43358 317 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 IL9RQ01113 521 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 NBPF12Q5TAG4 269 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 FOXR2Q6PJQ5 311 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SPOCD1Q6ZMY3 1216 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ZNF572Q7Z3I7 529 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MAP4K3Q8IVH8 894 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ZC3H3Q8IXZ2 948 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SCYL3Q8IZE3 742 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 RPS6KC1Q96S38 1066 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 TARS2Q9BW92 718 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 O00370 1275 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PROSCO94903 275 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 RAP1GAPP47736 663 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PKN2Q16513 984 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CNPY4Q8N129 248 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PXMP2Q9NR77 195 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 TCP11X1B4DZS4 312 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PPFIA2O75334 1257 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 GGPS1O95749 300 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 WEE2P0C1S8 567 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MUTP22033 750 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 TAS2R40P59535 323 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MXRA7P84157 204 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PCNX4Q63HM2 1172 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ART4Q93070 314 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 GINS2Q9Y248 185 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 RIPK3Q9Y572 518 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PCDHA3Q9Y5H8 950 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 IKBKGQ9Y6K9 419 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MYH11P35749 1972 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ECHS1P30084 290 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 GMPSP49915 693 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 GPC3P51654 580 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 BLVRAP53004 296 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PPP2R5CQ13362 524 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 STXBP2Q15833 593 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 DAW1Q8N136 415 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 TGS1Q96RS0 853 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MAK16Q9BXY0 300 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 MRPL47Q9HD33 250 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 HACL1Q9UJ83 578 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ZNRF3Q9ULT6 936 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CCDC88CQ9P219 2028 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ASTN2O75129 1339 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 UMODL1Q5DID0 1318 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 EXOC1LA0A1B0GW35 172 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CCT8L1PA6NM43 557 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PRKCBP05771 671 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 GTF2BQ00403 316 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 ZBTB16Q05516 673 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 DCAF12L1Q5VU92 463 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 CYB5D1Q6P9G0 228 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 DARS2Q6PI48 645 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 APLFQ8IW19 511 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 UBA3Q8TBC4 463 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SLC7A3Q8WY07 619 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 PITPNM3Q9BZ71 974 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 OSBPL8Q9BZF1 889 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 RBAKQ9NYW8 714 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 KCND2Q9NZV8 630 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 POLIQ9UNA4 740 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 R3HDM2Q9Y2K5 976 aaKnown RBP5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SLC4A7Q9Y6M7 1214 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 SCINQ9Y6U3 715 aa5.23□□□□□ -1.57
SMAD4-202ENST00000398417 H0YCG3 227 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 K7ERI5 159 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CHUKO15111 745 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CFHP08603 1231 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MYBL1P10243 752 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 CA4P22748 312 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 DRP2Q13474 957 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MYBPC2Q14324 1141 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FYB2Q5VWT5 728 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ARHGEF18Q6ZSZ5 1173 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 MYCBPQ99417 103 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FAM167BQ9BTA0 163 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 APOL6Q9BWW8 343 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ANKEF1Q9NU02 776 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 FBXO40Q9UH90 709 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 IP6K2Q9UHH9 426 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 ZMYM2Q9UBW7 1377 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 SYNJ2BP-COX16A0A087WUM0 186 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 RASA4BC9J798 803 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 INO80B-WBP1J3KQ70 363 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 M0QYV0 167 aa5.22□□□□□ -1.57
SMAD4-202ENST00000398417 RASA4O43374 803 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms