RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 KIFC3Q9BVG8 833 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 C2orf40Q9H1Z8 148 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 PLEKHA4Q9H4M7 779 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 FNIP2Q9P278 1114 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 IGSF9Q9P2J2 1179 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 GDAQ9Y2T3 454 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 MYH15Q9Y2K3 1946 aa10.82□□□□□ -0.68
NIFKP1-201ENST00000398317 CACNA1IQ9P0X4 2223 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 FRYLO94915 3013 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 KIF4AO95239 1232 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 THP07101 528 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 CYP11B2P19099 503 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 IGFBP6P24592 240 aaPredicted RBP10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 RPA1P27694 616 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 MAPK6Q16659 721 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 FAM171A1Q5VUB5 890 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 EEF1DP3Q658K8 133 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 SLC44A3Q8N4M1 653 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 ERMNQ8TAM6 284 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 DEPTORQ8TB45 409 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 HDAC7Q8WUI4 952 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 HPS1Q92902 700 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 TTPALQ9BTX7 342 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 ZDHHC7Q9NXF8 308 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 EPS15L1Q9UBC2 864 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 CA14Q9ULX7 337 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 LIMCH1Q9UPQ0 1083 aa10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.68
NIFKP1-201ENST00000398317 EP300Q09472 2414 aaPredicted RBP10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 CITO14578 2027 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 MYH11P35749 1972 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 PROB1E7EW31 1015 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 ACKR2O00590 384 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 ADAM12O43184 909 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 PAPLNO95428 1278 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 AOC1P19801 751 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 CCT6AP40227 531 aaKnown RBP10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 NBL1P41271 181 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 NTHL1P78549 312 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 ARID5BQ14865 1188 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 NAB2Q15742 525 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 PSMD5Q16401 504 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 NT5DC1Q5TFE4 455 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 FRMD5Q7Z6J6 570 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 GPR65Q8IYL9 337 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 LNX1Q8TBB1 728 aaPredicted RBP10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 CLSTN3Q9BQT9 956 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 ADPGKQ9BRR6 497 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 BHMT2Q9H2M3 363 aa10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
NIFKP1-201ENST00000398317 GVINP1Q7Z2Y8 2422 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 PRR23AA6NEV1 266 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 CCL16O15467 120 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 C1RP00736 705 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 LAMP2P13473 410 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 FSHRP23945 695 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 VARSP26640 1264 aaKnown RBP10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 NAMPTP43490 491 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 CREMQ03060 361 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 GNL2Q13823 731 aaKnown RBP10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 GLRA4Q5JXX5 417 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 GRASPQ7Z6J2 395 aaPredicted RBP10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 C4orf32Q8N8J7 132 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 DTWD2Q8NBA8 298 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 FBXO18Q8NFZ0 1043 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 GPR152Q8TDT2 470 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 PIK3R5Q8WYR1 880 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 IFT74Q96LB3 600 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 RTP3Q9BQQ7 232 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 WNT16Q9UBV4 365 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 FKBPLQ9UIM3 349 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 FBXW11Q9UKB1 542 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 KIAA1024Q9UPX6 916 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 DCHS1Q96JQ0 3298 aa10.79□□□□□ -0.68
NIFKP1-201ENST00000398317 ZNF292O60281 2723 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 C8AP07357 584 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 SRFP11831 508 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 RFX1P22670 979 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 RBM25P49756 843 aaKnown RBP10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 ORC2Q13416 577 aaPredicted RBP10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 HTR4Q13639 388 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 PPP2R5AQ15172 486 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 ANGPT1Q15389 498 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 DCAF4L1Q3SXM0 396 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 LIN9Q5TKA1 542 aa10.78□□□□□ -0.68
NIFKP1-201ENST00000398317 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms