RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TMED1Q13445 227 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 STAT4Q14765 748 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 SLC35G1Q2M3R5 365 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 C16orf86Q6ZW13 317 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 TMEM143Q96AN5 459 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 C18orf8Q96DM3 657 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 OSBPL8Q9BZF1 889 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC40-204ENST00000397545 CAND2O75155 1236 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 ZWINTO95229 277 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 FAM153BP0C7A2 387 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 RPA1P27694 616 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
CCDC40-204ENST00000397545 WDR72Q3MJ13 1102 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 FAM153CQ494X1 144 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 HABP4Q5JVS0 413 aaKnown RBP11.38□□□□□ -0.59
CCDC40-204ENST00000397545 CENPPQ6IPU0 288 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 EPS8L3Q8TE67 593 aaKnown RBP11.38□□□□□ -0.59
CCDC40-204ENST00000397545 RMDN2Q96LZ7 410 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 FAM153AQ9UHL3 310 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 PRR12Q9ULL5 1215 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 NEU2Q9Y3R4 380 aa11.38□□□□□ -0.59
CCDC40-204ENST00000397545 hCG_2014768A0A024R1R8 64 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CCDC78A2IDD5 438 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 MED24O75448 989 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 APRTP07741 180 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CPA2P48052 419 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 ITGA8P53708 1063 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 SESN2P58004 480 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 TSTA3Q13630 321 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 PRAMEF18Q5VWM3 479 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 ST13P4Q8IZP2 240 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 DHX35Q9H5Z1 703 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 XAB2Q9HCS7 855 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 MYO3BQ8WXR4 1341 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CACNA1SQ13698 1873 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CREB3O43889 395 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 ENO1P06733 434 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 PON1P27169 355 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 PGM1P36871 562 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 PPP4CP60510 307 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 AGBL2Q5U5Z8 902 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 RWDD4Q6NW29 188 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 KIAA1586Q9HCI6 787 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 PCDHA10Q9Y5I2 948 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 GPR75-ASB3A0A0A6YYF3 556 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 SDC4P31431 198 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 ESRRGP62508 458 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 MTRQ99707 1265 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 RUSC1Q9BVN2 902 aa11.37□□□□□ -0.59
CCDC40-204ENST00000397545 COL22A1Q8NFW1 1626 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-204ENST00000397545 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 PALM3A6NDB9 673 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 GRAP2O75791 330 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 KRT7P08729 469 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 EIF3EP60228 445 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 SMTNL2Q2TAL5 461 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 CYB5D1Q6P9G0 228 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 ZNF571Q7Z3V5 609 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 KIAA0895Q8NCT3 520 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 MORC4Q8TE76 937 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 PSPC1Q8WXF1 523 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 ASNSD1Q9NWL6 643 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 SUCLA2Q9P2R7 463 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 CHMP2BQ9UQN3 213 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 FAM47DPA6NHR8 397 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 PDE2AO00408 941 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 GGPS1O95749 300 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 KRT3P12035 628 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 ITIH2P19823 946 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 TYK2P29597 1187 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 ALDH18A1P54886 795 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 RUBCNQ92622 972 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 EFHD1Q9BUP0 239 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 FBXO28Q9NVF7 368 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 BAG5Q9UL15 447 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 RAB21Q9UL25 225 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 ZBBXA8MT70 800 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 SLC16A3O15427 465 aaKnown RBP11.36□□□□□ -0.59
CCDC40-204ENST00000397545 AKAP3O75969 853 aa11.36□□□□□ -0.59
CCDC40-204ENST00000397545 OATP04181 439 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms